1 5' 3' | 2 5' 3' | 3 5' 3' |
GTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtgttgtagacctacacatacctcgtgacaaggaaactagccgaccaaaaggctatgcttttgctgagtatgaaacagaggagattgcccaat...
species | Zea mays |
transcript | GRMZM2G175676_T06 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGGATGAACAAGGTTCCTGGAGAGGGTTCTGTATGAAATTCTTATTCAG ATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCTEST: gi|211020294|gb|FL072144.1|FL072144
genomic: TGG-ATGA-CAAGGTTCCTG-AGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtg ... attttggcagATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCT
EST: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAG ATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCTEST: gi|211020297|gb|FL072147.1|FL072147
genomic: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtg ... attttggcagATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCT
EST: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAG ATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCTEST: gi|211020291|gb|FL072141.1|FL072141
genomic: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtg ... attttggcagATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCT
EST: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAG ATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCTEST: gi|211020292|gb|FL072142.1|FL072142
genomic: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtg ... attttggcagATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCT
EST: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAG ATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCT
genomic: ACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtg ... attttggcagATCTCTGGGCAAGACAAACCCTCATTAAATGGCAATATCCCTGTAACTCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAACTTGGATGACAAGGTTCCTGAGAGGGTTCTGTATGAAATTCTTATTCAGgtaggtcgtgttgtagacctacacatacctcgtgacaaggaaactagccgaccaaaaggctatgcttttgctgagtatgaaacagaggagattgcccaat
- - - - - - - - - - - GAGAGG