Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|91055195|gb|EB165613.1|EB165613EST: AGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGATA
genomic: AGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|91055195|gb|EB165613.1|EB165613EST: AGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGATA
genomic: AGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|78125522|gb|DV543906.1|DV543906EST: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGATA
genomic: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|78125522|gb|DV543906.1|DV543906EST: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGATA
genomic: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|71773226|gb|DR971135.1|DR971135EST: AAAGAAAGCGGATACTTGCATAACCACCTCGTCCAACGATGACCCCAAGATA
genomic: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|71773226|gb|DR971135.1|DR971135EST: AAAGAAAGCGGATACTTGCATAACCACCTCGTCCAACGATGACCCCAAGATA
genomic: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|74234435|gb|DT642349.1|DT642349EST: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGATA
genomic: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|74234435|gb|DT642349.1|DT642349EST: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGATA
genomic: AAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAG--Agtaagaagca ... gagctagta
EST:
gi|71757334|gb|DR955271.1|DR955271EST: ATAACCACCTCGTACAACGATGACCCCAAGA CAGATGCGAGCAACACGGCTGCAGCCATCTCGCCGAATGGCGGCAGCGGCG
genomic: ATAACCACCTCGTACAACGATGACCCCAAGAgtaagaagca ... gagctagtagCAGGTGCGAGCAACACGGCTGCAGCCATCTCGCCGAATGGCGGCAGCGGCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATCAGCGCACAGGGCAATAATGACCACTCGTCGCCGCCACCGCCGGCGCCAAAGAAAGCGGATACTTGCATAACCACCTCGTACAACGATGACCCCAAGAgtaagaagcattcgagatcatgcatctagctgtgatgtcatcagcatgcatatataatctctgcactcaaagatattctatagctagctaactccacatg
- - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA