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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACGCCAGATTTTGATTGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatggttaccttgctgcaaaattgcaaacttccttactccccttctcaatccatagttttcatcgtcagttacatcactcaagtatacttgctt...

Basic information

species Zea mays
transcript GRMZM2G164916_T02
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211278360|gb|FL132343.1|FL132343
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|211278361|gb|FL132344.1|FL132344
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|211278362|gb|FL132345.1|FL132345
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|211404678|gb|FL116464.1|FL116464
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|211432715|gb|FL449161.1|FL449161
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|9952394|gb|BE638977.1|BE638977
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|71775257|gb|DR973135.1|DR973135
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|76018661|gb|DT945831.1|DT945831
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
EST: gi|211280152|gb|FL132346.1|FL132346
EST:     TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTG                         CTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT
genomic: TGTTCCACATCTTCTTTCATCTCTGAGGGGTTTCCCGTCTTCCTCGCCTGgttagttatg ... tttcttgcagCTCTAATGGCTAAAGAACAGGATGGATCCCCCAAGGTGCGCCACCCAGAAT