1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AAGGTCATCTGGAGTAAATGGTGGTGTGACCAATCCATCACCCAATAAGGATAAATCTGGTGATAAAAGTAGCATCTCTCCAGCAAGCATGACAAAGAAGgtatggttgctgccttctgcacatctatcattaaatgttggcgcttccttgaaactacctgatcatggatttcttccatgtttaagttttgtaccaaaca...
species | Zea mays |
transcript | GRMZM2G163912_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATAAATCTGGTGATAAAAGTAGCATCTCTCCAGCAAGCATGACAAAGAAG TGTACGCCGTTGGCACCTAGGAAGACTTTGCAGCCTGAGCAAGCATTTCACEST: gi|31359702|gb|CD444059.1|CD444059
genomic: ATAAATCTGGTGATAAAAGTAGCATCTCTCCAGCAAGCATGACAAAGAAGgtatggttgc ... tttgtttcagTGTACGCCGTTGGCACCTAGGAAGACTTTGCAGCCTGAGCAAGCATTTCAC
EST: ATAAATCTGGTGATAAAAGTAGCATCTCTCCAGCAAGCATGACAAAGAAG TGTACGCCGTTGGCACCTAGGAAGACTTTGCAGCCTGAGCAAGCATTTCAC
genomic: ATAAATCTGGTGATAAAAGTAGCATCTCTCCAGCAAGCATGACAAAGAAGgtatggttgc ... tttgtttcagTGTACGCCGTTGGCACCTAGGAAGACTTTGCAGCCTGAGCAAGCATTTCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGGTCATCTGGAGTAAATGGTGGTGTGACCAATCCATCACCCAATAAGGATAAATCTGGTGATAAAAGTAGCATCTCTCCAGCAAGCATGACAAAGAAGgtatggttgctgccttctgcacatctatcattaaatgttggcgcttccttgaaactacctgatcatggatttcttccatgtttaagttttgtaccaaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG