1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGGATCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctcgcaaaccgtcgcccgtatcgtataggtgttagagagtttgagcagttgctacattctcctgcagttggagaattagccttgtagatatgc...
species | Zea mays |
transcript | GRMZM2G161988_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTG TCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTTEST: gi|71426648|gb|DR807698.1|DR807698
genomic: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctc ... tcttgcacagTCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTT
EST: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTG TCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTTEST: gi|211367193|gb|FL206096.1|FL206096
genomic: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctc ... tcttgcacagTCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTT
EST: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTG TCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTTEST: gi|211367190|gb|FL206093.1|FL206093
genomic: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctc ... tcttgcacagTCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTT
EST: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTG TCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTTEST: gi|211364541|gb|FL206092.1|FL206092
genomic: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctc ... tcttgcacagTCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTT
EST: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTG TCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTT
genomic: TCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctc ... tcttgcacagTCTTTTATTGTCTTCGCAAGACCTATCAAATTCGCAGTAATGTTTACATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGATCTACGCCTTCGCGGCATGTTTGGTGGCCGGACTCACCCTCATGATCTTGgtacgctctcgcaaaccgtcgcccgtatcgtataggtgttagagagtttgagcagttgctacattctcctgcagttggagaattagccttgtagatatgc
- - - - - - - - - - - - TGGTGG