1 5' 3' | 2 5' 3' | 3 5' 3' |
GTTCGCACTATTAAAGTGGAAAAGAGGATCAATGAGATTGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGGgtatgtcacatttatttgaaagcatttctgtcgtcatttttatgtcagcaactcagcattctataatgaacatggttaagtatttttctttttgtttttg...
species | Zea mays |
transcript | GRMZM2G157332_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGG CTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGCEST: gi|148929096|gb|EC874464.2|EC874464
genomic: TGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGGgtatgtcaca ... ttcctgccagCTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGC
EST: TGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGG CTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGCEST: gi|16378394|gb|BI992425.1|BI992425
genomic: TGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGGgtatgtcaca ... ttcctgccagCTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGC
EST: TGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGG CTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGCEST: gi|13559010|gb|BG550365.1|BG550365
genomic: TGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGGgtatgtcaca ... ttcctgccagCTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGC
EST: AAAGGTGGAACGGAAACCTGATTTAAAGG CTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGC
genomic: AAAGGTGGAACGGAAACCTGATTTAAAGGgtatgtcaca ... ttcctgccagCTGAAAGAGAGGCTATTAGTGCTGCTGAAAAGGCAGAAAGAAAGGCACAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCGCACTATTAAAGTGGAAAAGAGGATCAATGAGATTGTGAACCGCTTGAATAAGACAAAGGTGGAACGGAAACCTGATTTAAAGGgtatgtcacatttatttgaaagcatttctgtcgtcatttttatgtcagcaactcagcattctataatgaacatggttaagtatttttctttttgtttttg
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