Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211508051|gb|FL351572.1|FL351572EST: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAG ATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
genomic: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAGgtaactgact ... acgatcgcagATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
EST:
gi|211022949|gb|FL309675.1|FL309675EST: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAG ATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
genomic: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAGgtaactgact ... acgatcgcagATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
EST:
gi|211088239|gb|FL309315.1|FL309315EST: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAG ATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
genomic: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAGgtaactgact ... acgatcgcagATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
EST:
gi|211206023|gb|FL351337.1|FL351337EST: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAG ATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
genomic: TGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAGgtaactgact ... acgatcgcagATCGGTGCAGGATTGGGACGGCGGAGCCTCAGGACGAGTGGTATTTCTTCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCTACTACTACCTGAGGAAGAAGGTTGCCTATGAGCCCATAGATCTTGATGTCATAAGGGAGGTGGACCTCAACAAGCTTGAACCATGGGACCTCAAAGgtaactgactaataacttgaatgcggtgtactagtagaaatctaagagctaataatgtctagtgtttcacaatatgtgttcatggtggacgatcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT