1 5' 3' | 2 5' 3' | 3 5' 3' |
GTCAACGATCCGCCAGTGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGgtatggacctactcgctgcccaccgatcgttagcggatttggttctgaaactgtgtttgaatcagacatccctagttagttatttcctagatacaatgat...
species | Zea mays |
transcript | GRMZM2G153766_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATG GTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACAEST: gi|211096938|gb|FL476433.1|FL476433
genomic: TGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGgtatggacct ... ttctgtttagGTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACA
EST: TGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATG GTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACAEST: gi|60353752|gb|DN220725.1|DN220725
genomic: TGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGgtatggacct ... ttctgtttagGTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACA
EST: TGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATG GTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACAEST: gi|211154212|gb|FL453082.1|FL453082
genomic: TGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGgtatggacct ... ttctgtttagGTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACA
EST: GCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATG GTACATTCAGCAGACTCTTTGTTGAAATTAGTGTCGGAACTTAAGAGGACA
genomic: GCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGgtatggacct ... ttctgtttagGTACATTCAGCAGACTCTCTGTTGAAATTAGTGTCGGAACTTAAGAGGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCAACGATCCGCCAGTGCGCAACTCGCAGGAGGCCTTCCAGATGGAGATGCGCGCCGCCCGCATGgtatggacctactcgctgcccaccgatcgttagcggatttggttctgaaactgtgtttgaatcagacatccctagttagttatttcctagatacaatgat
- - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - GAGATG