Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcag

Basic information

species Zea mays
transcript GRMZM2G152328_T01
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211391310|gb|FL330077.1|FL330077
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211422125|gb|FL330493.1|FL330493
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCRGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211046893|gb|FL341766.1|FL341766
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211157728|gb|FL360808.1|FL360808
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211077505|gb|FL307130.1|FL307130
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211314060|gb|FL325144.1|FL325144
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211287612|gb|FL250247.1|FL250247
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCC-GAGGGSCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211344319|gb|FL310881.1|FL310881
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGG-CGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211285129|gb|FL337146.1|FL337146
EST:     MMGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATRGTCAAG                         GCTGGGTTMGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211287611|gb|FL250246.1|FL250246
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211532043|gb|FL347056.1|FL347056
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211280214|gb|FL366624.1|FL366624
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211308708|gb|FL364506.1|FL364506
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211340147|gb|FL341977.1|FL341977
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|8273069|gb|BE012164.1|BE012164
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211407470|gb|FL353814.1|FL353814
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211134154|gb|FL319319.1|FL319319
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTKGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211444448|gb|FL323468.1|FL323468
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211470853|gb|FL358528.1|FL358528
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|67017533|gb|CO446282.1|CO446282
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211468126|gb|FL352527.1|FL352527
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211059308|gb|FL364336.1|FL364336
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211287613|gb|FL250248.1|FL250248
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211543078|gb|FL311080.1|FL311080
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211210333|gb|FL310322.1|FL310322
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211531503|gb|FL328874.1|FL328874
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211088879|gb|FL336470.1|FL336470
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211307986|gb|FL326513.1|FL326513
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|14242811|gb|BG840625.2|BG840625
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211210817|gb|FL334771.1|FL334771
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACG-CCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211532538|gb|FL366389.1|FL366389
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGNTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211188115|gb|FL321601.1|FL321601
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCKACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211413966|gb|FL312342.1|FL312342
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCSGCKACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211351953|gb|FL331044.1|FL331044
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGCGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211226828|gb|FL341084.1|FL341084
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211301728|gb|FL323898.1|FL323898
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|5566832|gb|AI881743.1|AI881743
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211469613|gb|FL315638.1|FL315638
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211264639|gb|FL311275.1|FL311275
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|8103408|gb|AW928047.1|AW928047
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211340157|gb|FL341987.1|FL341987
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGMTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211116610|gb|FL350322.1|FL350322
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211495423|gb|FL352081.1|FL352081
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211424736|gb|FL330505.1|FL330505
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211205587|gb|FL329102.1|FL329102
EST:     CCGAGGATATCCAGCCCCTCGTCTGCKACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211040749|gb|FL336916.1|FL336916
EST:     CCGAGGATATCCAGCCCCTCGTCTGCNACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCKT-GCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCG-C-TGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCG
EST: gi|211475216|gb|FL333752.1|FL333752
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCTGGCGACGACGCCC-GAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211440519|gb|FL343491.1|FL343491
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
EST: gi|211393908|gb|FL329734.1|FL329734
EST:     CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG                         GCTGGGTTCGCCGGCGACGAMGCCCCGAGGGCCGTCTTCCCCAGCATCGTG
genomic: CCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccacc ... acctcggcagGCTGGGTTCGCTGGCGACGACGCCCCGAGGGCCGTCTTCCCCAGCATCGTG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAGgtaagccaccggtttggtcacatctgttcttgagaatgcaaggttctcggtggctgctggggccctaacaacaacaccaacctcggcag

- - - - - - - - -  GAGGAT