1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCATGAGgtactctttctcccatcgcatccgctttgttgtgcatcagttctttgcgatagaaatgccggtttcgtgtagttgtcttgtccactgccatggtaggatt...
species | Zea mays |
transcript | GRMZM2G144387_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCAGCCATGAGEST: gi|32865991|gb|CF005673.1|CF005673
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211038053|gb|FL324592.1|FL324592
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211205849|gb|FL344234.1|FL344234
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|67031999|gb|CO460748.1|CO460748
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32831798|gb|CD971476.1|CD971476
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31361118|gb|CD445475.1|CD445475
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211128559|gb|FL314413.1|FL314413
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211396420|gb|FL326112.1|FL326112
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211522801|gb|FL337769.1|FL337769
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31558473|gb|CD527685.1|CD527685
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211333248|gb|FL338545.1|FL338545
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211267379|gb|FL327854.1|FL327854
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31356278|gb|CD440635.1|CD440635
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60346809|gb|DN213782.1|DN213782
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32915327|gb|CF020139.1|CF020139
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|5525264|gb|AI861103.1|AI861103
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32846056|gb|CD985737.1|CD985737
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211082981|gb|FL307157.1|FL307157
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71318356|gb|DR795940.1|DR795940
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211093806|gb|FL338260.1|FL338260
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211233023|gb|FL341135.1|FL341135
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31997784|gb|CD661769.1|CD661769
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71764450|gb|DR962387.1|DR962387
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211073651|gb|FL383785.1|FL383785
genomic: GCAGCCATGAG
EST: TCAAACCCTAAGCAGCCATGAGEST: gi|60356469|gb|DN223442.1|DN223442
genomic: TCAAACCCTAAGCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60349659|gb|DN216632.1|DN216632
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|67016451|gb|CO445200.1|CO445200
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|19770531|gb|BQ035252.1|BQ035252
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211316044|gb|FL324354.1|FL324354
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|12046107|gb|BF728246.1|BF728246
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71429061|gb|DR810111.1|DR810111
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211208161|gb|FL329110.1|FL329110
genomic: GCAGCCATGAG
EST: GCAGSCATGAGEST: gi|211314307|gb|FL338888.1|FL338888
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31359377|gb|CD443734.1|CD443734
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71439364|gb|DR820414.1|DR820414
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211193066|gb|FL327267.1|FL327267
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211346721|gb|FL310895.1|FL310895
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|18660469|gb|BM500878.1|BM500878
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|93015413|gb|EB640933.1|EB640933
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211028398|gb|FL329799.1|FL329799
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32907236|gb|CF012049.1|CF012049
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|37399690|gb|CF637178.1|CF637178
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211072619|gb|FL332510.1|FL332510
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71311310|gb|DR791971.1|DR791971
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|28361697|gb|CB240053.1|CB240053
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32907369|gb|CF012182.1|CF012182
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211510097|gb|FL332413.1|FL332413
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|116815184|gb|EC857838.1|EC857838
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|78180918|gb|DV551291.1|DV551291
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211019242|gb|FL365616.1|FL365616
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211283162|gb|FL328201.1|FL328201
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32857712|gb|CD997393.1|CD997393
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211442768|gb|FL349584.1|FL349584
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211061868|gb|FL348033.1|FL348033
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60356727|gb|DN223700.1|DN223700
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211393799|gb|FL326099.1|FL326099
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|22819612|gb|BU499702.1|BU499702
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32915734|gb|CF020546.1|CF020546
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32865077|gb|CF004759.1|CF004759
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|29130620|gb|CB381324.1|CB381324
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211289779|gb|FL366226.1|FL366226
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60395702|gb|DN228572.1|DN228572
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71437006|gb|DR818056.1|DR818056
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32863499|gb|CF003181.1|CF003181
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32862720|gb|CF002402.1|CF002402
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|93015208|gb|EB640728.1|EB640728
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|9743022|gb|BE519170.1|BE519170
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60352287|gb|DN219260.1|DN219260
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31356277|gb|CD440634.1|CD440634
genomic: GCAGCCATGAG
EST: GCAGACATGAGEST: gi|15053222|gb|BI358767.1|BI358767
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|29543541|gb|CB603923.1|CB603923
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32847345|gb|CD987026.1|CD987026
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60352018|gb|DN218991.1|DN218991
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|31998254|gb|CD661995.1|CD661995
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|28931172|gb|CB334533.1|CB334533
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|26557762|gb|CA829997.1|CA829997
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60354025|gb|DN220998.1|DN220998
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|71772977|gb|DR970898.1|DR970898
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|4886001|gb|AI677121.1|AI677121
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|28576041|gb|CB281933.1|CB281933
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|213170184|gb|FM193649.1|FM193649
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211185496|gb|FL313586.1|FL313586
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60345082|gb|DN212055.1|DN212055
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60349298|gb|DN216271.1|DN216271
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|120480250|gb|EH210783.1|EH210783
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211448765|gb|FL325249.1|FL325249
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211157135|gb|FL327686.1|FL327686
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211270490|gb|FL356086.1|FL356086
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211531513|gb|FL328884.1|FL328884
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|67040517|gb|CO466772.1|CO466772
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|22521050|gb|BU079861.1|BU079861
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|9733727|gb|BE512479.1|BE512479
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211510060|gb|FL330172.1|FL330172
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60352016|gb|DN218989.1|DN218989
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60352607|gb|DN219580.1|DN219580
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|84980830|gb|DW531179.1|DW531179
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211388158|gb|FL311852.1|FL311852
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|32921553|gb|CF026365.1|CF026365
genomic: GCAGCCATGAG
EST: GCAGTCATGAGEST: gi|71445136|gb|DR826186.1|DR826186
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|211514843|gb|FL332902.1|FL332902
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|67030302|gb|CO459051.1|CO459051
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|84980654|gb|DW531003.1|DW531003
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|60354739|gb|DN221712.1|DN221712
genomic: GCAGCCATGAG
EST: GCAGCCATGAGEST: gi|9794588|gb|BE552896.1|BE552896
genomic: GCAGCCATGAG
EST: GCAGCCATGAG
genomic: GCAGCCATGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCATGAGgtactctttctcccatcgcatccgctttgttgtgcatcagttctttgcgatagaaatgccggtttcgtgtagttgtcttgtccactgccatggtaggatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gatagaaa