1 5' 3' | 2 5' 3' | 3 5' 3' |
GTGATAAGTCCATTAAGATTGCTGACTTTGGAGTGGCTAGGATTGAAGTCAAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgatcaaacatgctctttgtcctgtttatttcaatcagtcatcatgctattccaataaggcaaatctgttttaaattgagttatttctttttgc...
species | Zea mays |
transcript | GRMZM2G140612_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCC TGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTTEST: gi|9254961|gb|BE345429.1|BE345429
genomic: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgat ... ccactcgcagTGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTT
EST: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCC TGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTTEST: gi|28909513|gb|CB330966.1|CB330966
genomic: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgat ... ccactcgcagTGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTT
EST: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCC TGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTTEST: gi|32912327|gb|CF017139.1|CF017139
genomic: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgat ... ccactcgcagTGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTT
EST: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCC TGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTTEST: gi|32912473|gb|CF017285.1|CF017285
genomic: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgat ... ccactcgcagTGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTT
EST: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCC TGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTT
genomic: AAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgat ... ccactcgcagTGAAATGATCCAGCATAGGCCATACAACCAGAAAGTTGATGTCTACAGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGATAAGTCCATTAAGATTGCTGACTTTGGAGTGGCTAGGATTGAAGTCAAGACTGAGGGGATGACACCTGAAACTGGAACATACCGCTGGATGGCTCCgtaagttgatcaaacatgctctttgtcctgtttatttcaatcagtcatcatgctattccaataaggcaaatctgttttaaattgagttatttctttttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA