1 5' 3' | 2 5' 3' | 3 5' 3' |
GGTGGAGTTTGAAATAGAGGATGAGATAGCAGATCTGCTGGAGATGGCCTTAATATGgtacatataatcatgtattatatttgttttgcattttgaatgttaacatgtcaatgaaaacagaagataatttgtgcatgcttctttctaaggcattcag...
species | Zea mays |
transcript | GRMZM2G136901_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTTGAAATAGAGGATGAGATAGCAGATCTGCTGGAGATGGCCTTAATATG CTACCTTGTCGCAGCAGCCATTTTGCAGTGCTTGTGGAGCCTTTTGCTAGCEST: gi|211462304|gb|FL096438.1|FL096438
genomic: TTTGAAATAGAGGATGAGATAGCAGATCTGCTGGAGATGGCCTTAATATGgtacatataa ... ttttgatcagCTACCTTGTCGCAGCAGCCATTTTGCAGTGCTTGTGGAGCCTTTTGCTAGC
EST: TTTGAAATAGAGGATGAGATAGCAGATCTGCTGGAGATGGCCTTAATATG CTACCTTGTCGCAGCAGCCATTTTGCAGTGCTTGTGGAGCCTTTTGCTAGC
genomic: TTTGAAATAGAGGATGAGATAGCAGATCTGCTGGAGATGGCCTTAATATGgtacatataa ... ttttgatcagCTACCTTGTCGCAGCAGCCATTTTGCAGTGCTTGTGGAGCCTTTTGCTAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGGAGTTTGAAATAGAGGATGAGATAGCAGATCTGCTGGAGATGGCCTTAATATGgtacatataatcatgtattatatttgttttgcattttgaatgttaacatgtcaatgaaaacagaagataatttgtgcatgcttctttctaaggcattcag
- - - - - - - AGAGGA
- - - - - - - - GAGGAT
- - - - - - - - AGGATG
- - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatgaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaagataa