Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctcccttggtcccgttctctgaccggtttcataggttccggtcgtgcctcatcttagggctttttagttgtcgggtcttggtttgtccggcgggtt...

Basic information

species Zea mays
transcript GRMZM2G135691_T02
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G135691_T02 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os02g26440.1 (Oryza sativa), 5'ss of exon 2
GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgtt---gctcccttggtcccgttctctga--ccggtttc---ataggttccggtcgtgcct-catcttagggctttttagttgtcgggtcttggtttgtccggcgggtt
|| ||| |||||||||||   |||||||| || ||||||| |||||||||||||||    |||| ||    |||   |||  |  ||  ||||    | |     | |||| | | ||||| |  | || |||     |      |  ||| |  ||      
GCTTTCGTGGAGCTGCAGGGTCGGATGATCGACACCACCGGGAAGATCAAGCAGgtccgagctcgctgcccccccccctcccattcccctttccccgtggaactagctcgttcttgcatctaaacgtttattatc---ccatctctaatttatttgg------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211243746|gb|FL206467.1|FL206467
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406517|gb|FL206565.1|FL206565
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|78119478|gb|DV537862.1|DV537862
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|60397449|gb|DN230265.1|DN230265
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|6020642|gb|AW065675.1|AW065675
EST:     GCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: GCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406513|gb|FL206561.1|FL206561
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245976|gb|FL206478.1|FL206478
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248204|gb|FL206484.1|FL206484
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252669|gb|FL206519.1|FL206519
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|32864476|gb|CF004158.1|CF004158
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248213|gb|FL206493.1|FL206493
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATASGGSCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|16921882|gb|BM075339.1|BM075339
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18170337|gb|BM340177.1|BM340177
EST:     AGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: AGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245970|gb|FL206472.1|FL206472
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211241511|gb|FL206450.1|FL206450
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248205|gb|FL206485.1|FL206485
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401421|gb|FL206531.1|FL206531
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401419|gb|FL206529.1|FL206529
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATTCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250434|gb|FL206500.1|FL206500
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211015242|gb|FL435062.1|FL435062
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403977|gb|FL206556.1|FL206556
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403967|gb|FL206546.1|FL206546
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCAAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403964|gb|FL206543.1|FL206543
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|28986330|gb|CB351082.1|CB351082
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250443|gb|FL206509.1|FL206509
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248209|gb|FL206489.1|FL206489
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245974|gb|FL206476.1|FL206476
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252677|gb|FL206527.1|FL206527
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243732|gb|FL206453.1|FL206453
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18174654|gb|BM350042.1|BM350042
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250432|gb|FL206498.1|FL206498
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403975|gb|FL206554.1|FL206554
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250433|gb|FL206499.1|FL206499
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248211|gb|FL206491.1|FL206491
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245972|gb|FL206474.1|FL206474
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211241513|gb|FL206452.1|FL206452
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406518|gb|FL206566.1|FL206566
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211444420|gb|FL322990.1|FL322990
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243738|gb|FL206459.1|FL206459
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|40334451|gb|CK368521.1|CK368521
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243733|gb|FL206454.1|FL206454
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401425|gb|FL206535.1|FL206535
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248203|gb|FL206483.1|FL206483
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401420|gb|FL206530.1|FL206530
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252675|gb|FL206525.1|FL206525
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401423|gb|FL206533.1|FL206533
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243735|gb|FL206456.1|FL206456
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245975|gb|FL206477.1|FL206477
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248215|gb|FL206495.1|FL206495
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248214|gb|FL206494.1|FL206494
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403973|gb|FL206552.1|FL206552
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCTCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243743|gb|FL206464.1|FL206464
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406511|gb|FL206559.1|FL206559
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18173078|gb|BM348466.1|BM348466
EST:     TCATGGAGCTGCAGTCCCGAATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252663|gb|FL206513.1|FL206513
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401424|gb|FL206534.1|FL206534
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|5847065|gb|AW000144.1|AW000144
EST:     GCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: GCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252665|gb|FL206515.1|FL206515
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18176156|gb|BM351212.1|BM351212
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250435|gb|FL206501.1|FL206501
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|17930898|gb|BM267858.1|BM267858
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211241512|gb|FL206451.1|FL206451
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|5296343|gb|AI783113.1|AI783113
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250440|gb|FL206506.1|FL206506
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252667|gb|FL206517.1|FL206517
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250444|gb|FL206510.1|FL206510
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401418|gb|FL206528.1|FL206528
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250446|gb|FL206512.1|FL206512
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403972|gb|FL206551.1|FL206551
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18172200|gb|BM347588.1|BM347588
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243739|gb|FL206460.1|FL206460
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248217|gb|FL206497.1|FL206497
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243736|gb|FL206457.1|FL206457
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211001477|gb|FL327079.1|FL327079
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243734|gb|FL206455.1|FL206455
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|28187899|gb|CB179509.1|CB179509
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211486175|gb|FL326650.1|FL326650
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248206|gb|FL206486.1|FL206486
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243744|gb|FL206465.1|FL206465
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211241510|gb|FL206449.1|FL206449
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|60346668|gb|DN213641.1|DN213641
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18166358|gb|BM336197.1|BM336197
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406515|gb|FL206563.1|FL206563
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245971|gb|FL206473.1|FL206473
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATTCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245966|gb|FL206468.1|FL206468
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211015243|gb|FL435063.1|FL435063
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403974|gb|FL206553.1|FL206553
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250438|gb|FL206504.1|FL206504
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCAAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243740|gb|FL206461.1|FL206461
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18172514|gb|BM347902.1|BM347902
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|76936800|gb|DV174905.1|DV174905
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAGGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406512|gb|FL206560.1|FL206560
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248212|gb|FL206492.1|FL206492
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245969|gb|FL206471.1|FL206471
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|33097178|gb|CF057138.1|CF057138
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401426|gb|FL206536.1|FL206536
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211248208|gb|FL206488.1|FL206488
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250436|gb|FL206502.1|FL206502
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245979|gb|FL206481.1|FL206481
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|60351221|gb|DN218194.1|DN218194
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403965|gb|FL206544.1|FL206544
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|78119479|gb|DV537863.1|DV537863
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211243745|gb|FL206466.1|FL206466
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252664|gb|FL206514.1|FL206514
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211250439|gb|FL206505.1|FL206505
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|74239056|gb|DT646970.1|DT646970
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|32911031|gb|CF015843.1|CF015843
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403978|gb|FL206557.1|FL206557
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245978|gb|FL206480.1|FL206480
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252676|gb|FL206526.1|FL206526
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252666|gb|FL206516.1|FL206516
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252670|gb|FL206520.1|FL206520
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18167829|gb|BM337669.1|BM337669
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18173503|gb|BM348891.1|BM348891
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252674|gb|FL206524.1|FL206524
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|5846965|gb|AW000044.1|AW000044
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406519|gb|FL206567.1|FL206567
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245973|gb|FL206475.1|FL206475
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211245980|gb|FL206482.1|FL206482
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211403969|gb|FL206548.1|FL206548
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211401432|gb|FL206542.1|FL206542
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|18163262|gb|BM333101.1|BM333101
EST:     ACCGCAAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACTTT
genomic: ACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211252671|gb|FL206521.1|FL206521
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
EST: gi|211406510|gb|FL206558.1|FL206558
EST:     TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAG                         TTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT
genomic: TCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 575

GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 377

GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 328

GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 509

GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctccct ... ctttcatcagTTACAAACCCAAATGCGTTCTAAAGAAGGGGAAAAGAAGCGTGCCTACCTTACTTTGGAGGAACTTCGCCAGTTGCCAGATGATACCAACACCTACAAGA


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCCTTCATGGAGCTGCAGTCCCGGATGATAGATACCACCGCGAAGATCAAGCAGgttgctcccttggtcccgttctctgaccggtttcataggttccggtcgtgcctcatcttagggctttttagttgtcgggtcttggtttgtccggcgggtt

- -  CATGGA
- - - - GGAGCT
- - - - - AGCTGC
- - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - -  AGATCA