1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGTGCTTGTGAAAGCCAAGGCGCAGGTAGAGGTGATCAAGGGGTTGTACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgcttcatccatattgatacatctgtttccagggtgatagcaatcgggttgtcgaaagcgatgtgtcatggttcatgtgtttggagggttgtggcttag
species | Zea mays |
transcript | GRMZM2G134862_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|6994090|gb|AW453304.1|AW453304
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|76285577|gb|DV025145.1|DV025145
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|71448432|gb|DR829482.1|DR829482
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|86470223|gb|DY236593.1|DY236593
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|60340983|gb|DN207956.1|DN207956
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|93016579|gb|EB642099.1|EB642099
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: CCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGAGTGAGACACATATGGTAGTGTCGATGCTTGCEST: gi|211468306|gb|FL243202.1|FL243202
genomic: CCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
EST: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAG GTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
genomic: TACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgct ... tgtggcttagGTACCATGCTGATTGGAGGACTGAGACACATATGGTAGTGTCGATGCTTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTGCTTGTGAAAGCCAAGGCGCAGGTAGAGGTGATCAAGGGGTTGTACGCGCGCCTGGCGGAAGTCCTCAAGGAATGCCCTGGGCAGTACTACAGgttaattgcttcatccatattgatacatctgtttccagggtgatagcaatcgggttgtcgaaagcgatgtgtcatggttcatgtgtttggagggttgtggcttag
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