Skip to another splice site:
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 5'  3'   		5  
 5'  3'   		6  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattctgccttttcccttaattttgcttttacatcatttctttaactatatctgtgttctcttgtttttatgcag

Basic information

species Zea mays
transcript GRMZM2G133213_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G133213_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os01g59930.2 (Oryza sativa), 5'ss of exon 2
AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattctgccttttcccttaattt-tg----cttttacatcatttctttaac-tatatctgtgttctcttgtttttatgcag----
|||||||||||||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||| ||||| ||||| | ||||  ||| ||     |  |||    ||| ||| || || ||  |     | |   |  ||| |      
AAAAGAAGCAAATAAGTCATAACGTGGCCAGATTCAAATTTGCTCTTCCAACTCCAACCTCTGTATTGGGCCTTCCAATTGGTCAGCATATCAGTTGCAGgtttggattccgccttatgcctttctttatgaagtttgctacccttttttttttacataaattggaaaaatgtatgtgctattcttttag

upper sequence: GRMZM2G133213_T01 (Zea mays), 5'ss of exon 2
lower sequence: Vv06s0009g01710.t01 (Vitis vinifera), 5'ss of exon 2
AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgtt------ttgattctgcctt---ttcccttaattt-tgcttttacatcatttctttaactatatctg-tgttctcttgtttttatgcag-------------------------------------------------
||   |  ||  | || |||||||| || |  || |  || ||||||||||| |||||||| || ||||| |||||||| || |||||||| || |||| ||       ||| ||  | |||   |||| || || |    |  ||  |  ||| |||     ||| || |       ||   ||||  ||                                                 
AACGCACCCAGCTCAGCCATAATGTGGCTAAATTTATATTTGCTCTTCCAACACCAACTTCAGTGTTGGGACTTCCAATTGGACAACATATGAGTTGCAAgtaggttggttgttttggtcttgtattccattcatatacaatgctatgtgttttgtttcttcgtatgtgatacatgtatgacattattgagtgccattagattctatcatgtgataaccttttatagtttttcccaacag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71448609|gb|DR829659.1|DR829659
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|148941936|gb|EC886923.2|EC886923
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211036824|gb|FL377561.1|FL377561
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149102560|gb|EE287919.2|EE287919
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211488678|gb|FL428183.1|FL428183
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGT
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGT
EST: gi|211092311|gb|FL381169.1|FL381169
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211130984|gb|FL371913.1|FL371913
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211034363|gb|FL377535.1|FL377535
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211022151|gb|FL381481.1|FL381481
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211070687|gb|FL369860.1|FL369860
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211397544|gb|FL373942.1|FL373942
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149037731|gb|EE155393.2|EE155393
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|78109074|gb|DV527491.1|DV527491
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211156328|gb|FL378563.1|FL378563
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAT-ACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|148961502|gb|EE012253.2|EE012253
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211490405|gb|FL381898.1|FL381898
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211223490|gb|FL386109.1|FL386109
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|76012143|gb|DT939313.1|DT939313
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149082026|gb|EE171198.2|EE171198
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211156688|gb|FL406074.1|FL406074
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211408063|gb|FL382720.1|FL382720
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211428817|gb|FL393474.1|FL393474
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211261098|gb|FL369177.1|FL369177
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211133803|gb|FL389461.1|FL389461
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTNATCAAGCCTTTATACCCCTACTA
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTT-ATACCCCTACTA
EST: gi|211156867|gb|FL415211.1|FL415211
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211063699|gb|FL417020.1|FL417020
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|78080766|gb|DV509178.1|DV509178
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211031806|gb|FL374010.1|FL374010
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|67014854|gb|CO443603.1|CO443603
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211323819|gb|FL407925.1|FL407925
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|60395988|gb|DN228858.1|DN228858
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149081654|gb|EE170805.2|EE170805
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149080052|gb|EE169070.2|EE169070
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211451633|gb|FL374385.1|FL374385
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|76291174|gb|DV030742.1|DV030742
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211294859|gb|FL410177.1|FL410177
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211518829|gb|FL412112.1|FL412112
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211164628|gb|FL401349.1|FL401349
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|32856318|gb|CD995999.1|CD995999
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211062814|gb|FL383357.1|FL383357
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAACCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211506310|gb|FL378320.1|FL378320
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211231553|gb|FL371571.1|FL371571
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211471318|gb|FL386742.1|FL386742
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211056836|gb|FL382513.1|FL382513
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211076467|gb|FL387317.1|FL387317
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|38688190|gb|CK145221.1|CK145221
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAG
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAG
EST: gi|211536313|gb|FL400262.1|FL400262
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|7162318|gb|AW519925.1|AW519925
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|18965165|gb|BM661428.1|BM661428
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149073961|gb|EE162290.2|EE162290
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211339234|gb|FL411894.1|FL411894
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211376856|gb|FL402406.1|FL402406
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211303371|gb|FL404506.1|FL404506
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|93017180|gb|EB642700.1|EB642700
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|50324318|gb|CO519444.1|CO519444
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211223692|gb|FL399499.1|FL399499
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211129521|gb|FL429574.1|FL429574
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211271215|gb|FL391999.1|FL391999
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|50328082|gb|CO523208.1|CO523208
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211116190|gb|FL414276.1|FL414276
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|148958580|gb|EC904827.2|EC904827
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|93014585|gb|EB640105.1|EB640105
EST:     GTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: GTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211215179|gb|FL411862.1|FL411862
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211494326|gb|FL423871.1|FL423871
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211373993|gb|FL393860.1|FL393860
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211532834|gb|FL377049.1|FL377049
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211294909|gb|FL412762.1|FL412762
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211205090|gb|FL419141.1|FL419141
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|149073131|gb|EE161405.2|EE161405
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|93014408|gb|EB639928.1|EB639928
EST:     GTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: GTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|50332760|gb|CO527886.1|CO527886
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211060115|gb|FL393163.1|FL393163
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211209584|gb|FL394649.1|FL394649
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211382028|gb|FL388795.1|FL388795
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|91051331|gb|EB161749.1|EB161749
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211423431|gb|FL384447.1|FL384447
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211271214|gb|FL391998.1|FL391998
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211439136|gb|FL388407.1|FL388407
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACWGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211527632|gb|FL412982.1|FL412982
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTWATCAAGCCTTTATACCCCTACTA
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTT-ATACCCCTACTA
EST: gi|37420514|gb|CF647948.1|CF647948
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACANGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211067941|gb|FL369839.1|FL369839
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211109351|gb|FL402581.1|FL402581
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211290231|gb|FL387862.1|FL387862
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211251784|gb|FL389217.1|FL389217
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211144799|gb|FL417397.1|FL417397
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211245226|gb|FL396982.1|FL396982
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAT-ACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211423822|gb|FL403259.1|FL403259
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTTCTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211159857|gb|FL403886.1|FL403886
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|211269194|gb|FL409750.1|FL409750
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|78117350|gb|DV535737.1|DV535737
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|18965111|gb|BM661399.1|BM661399
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
EST: gi|6056550|gb|AW090940.1|AW090940
EST:     ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAG                         AGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC
genomic: ACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 694

AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTACATTGGATTCTGATCTTGGATATTTTGAGCTTGTCATAAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1035

AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTACATTGGATTCTGATCTTGGATATTTTGAGCTTGTCATAAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 980

AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTACATTGGATTCTGATCTTGGATATTTTGAGCTTGTCATAAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 850

AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattc ... ttttatgcagAGGACAAGACGCTACAGGTGAAGAAGTAATCAAGCCTTATACCCCTACTACATTGGATTCTGATCTTGGATATTTTGAGCTTGTCATAAAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AAAAGAAGCAAATAAGTCATAATGTTGCCAGGTTCAAGTTCGCTCTTCCAACTCCAACTTCTGTATTGGGCCTTCCAATCGGTCAACATATCAGCTGCAGgttttgattctgccttttcccttaattttgcttttacatcatttctttaactatatctgtgttctcttgtttttatgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG