1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GCCATTGTTCATGACGCCGGCAAGGCGCGTGCCGCCGGCGGCGATGATCGGCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgattatttccagtgagaaatcttttggactgtgctgggtcagccgtcgtctctctctagtagctatagctactgtgctagttctactttatggtg...
species | Zea mays |
transcript | GRMZM2G130442_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTCEST: gi|149074354|gb|EE162738.2|EE162738
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTCEST: gi|148958328|gb|EC904551.2|EC904551
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTCEST: gi|101382672|gb|EB813390.1|EB813390
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTCEST: gi|71421131|gb|DR805311.1|DR805311
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTCEST: gi|148930913|gb|EC873379.2|EC873379
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTCEST: gi|148945742|gb|EC891022.2|EC891022
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
EST: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAG GCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
genomic: GCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgatta ... ggaatcgcagGCTGACCTCCTAGACAGCCATCAGCTGCAGCAAGCGTTCCAGCAGCAGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCATTGTTCATGACGCCGGCAAGGCGCGTGCCGCCGGCGGCGATGATCGGCCGGAATGGCTTCGCGTTTGGGTCCTCGTCGGCGCTGTCTTTAAGCCAGgtgatgattatttccagtgagaaatcttttggactgtgctgggtcagccgtcgtctctctctagtagctatagctactgtgctagttctactttatggtg
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