Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211045913|gb|FK963041.1|FK963041EST: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAG GTCTGGCCCGTTGATATAGATATGAAGTTC-TAGAGCCATTTGGACG
genomic: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAGgtacgaatcc ... ttgtatgcagGTCTGGCCCGTTGATATAGATATGAAGTTCCTAGAGCCATTTGGACG
EST:
gi|211042950|gb|FK963028.1|FK963028EST: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAG GTCTGGCCCGTTGATATAGATATGAAGTTCCTAGAGCCATTTGGACGGGAA
genomic: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAGgtacgaatcc ... ttgtatgcagGTCTGGCCCGTTGATATAGATATGAAGTTCCTAGAGCCATTTGGACGGGAA
EST:
gi|211167599|gb|FL258648.1|FL258648EST: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAG GTCTGGCCCGTTGATATAGATATGAAGTTCCTAGATCCATTTGGACGGGAA
genomic: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAGgtacgaatcc ... ttgtatgcagGTCTGGCCCGTTGATATAGATATGAAGTTCCTAGAGCCATTTGGACGGGAA
EST:
gi|211115674|gb|FL110115.1|FL110115EST: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAG GTCTGGCCCGTTGATATAGATATGAAGTTCCTA
genomic: AGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAGgtacgaatcc ... ttgtatgcagGTCTGGCCCGTTGATATAGATATGAAGTTCCTA
EST:
gi|161590278|gb|EY957950.1|EY957950EST: CGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAG GTCTGGCCCGTTGATATAGATATGAAGTTCCTAGAGCCATTTGGACGGGAA
genomic: CGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAGgtacgaatcc ... ttgtatgcagGTCTGGCCCGTTGATATAGATATGAAGTTCCTAGAGCCATTTGGACGGGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GATTGGCGAGGGGCTGGCTATGGAGGCGTTCGCGGAGGCAGCCGGGCCGGAGTGCATCGTGCCCGGACAGCAAGCGCCTCTAAGGCTTATGGGGCTCAAGgtacgaatccgtcggtagtttccttctccaatatgttaggaattgtgtcgtgattcttatgtggttgttgtagtttttagttattctatatatggtctta
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