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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGGGTGTTGCTGCTGCTGACCCTGAGGTTCCCCTTGCTTCTGTGGAGATCCCTGGTGCTTTGGATAGAGGCTATCTTCAAATGAGTGATCTCATTCAGgtatggttgcaagcagtcaacttgcatgttttattcttattttttaaatcctgtgtttctgtacatggagttcaatttggtgtgcatatttaggtttagg...

Basic information

species Zea mays
transcript GRMZM2G125777_T01
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211221451|gb|FL389605.1|FL389605
EST:     TCCCTGGTGCTTTGGATAGAGGCTATCTTCAAATGAGTGATCTCATTCAG                         GGTTTGGATGATCAAAATGGAAATGGTACACCTAGTTTGCCAGTTTCTGAT
genomic: TCCCTGGTGCTTTGGATAGAGGCTATCTTCAAATGAGTGATCTCATTCAGgtatggttgc ... tctttttcagGGTTTGGATGATCAAAATGGAAATGGTACACCTAGTTTGCCAGTTTCTGAT
EST: gi|67040214|gb|CO466469.1|CO466469
EST:     TCCCTGGTGCTTTGGATAGAGGCTATCTTCAAATGAGTGATCTCATTCAG                         GGTTTGGATGATCAAAATGGAAATGGTACACCTAGTTTGCCAGTTTCTGAT
genomic: TCCCTGGTGCTTTGGATAGAGGCTATCTTCAAATGAGTGATCTCATTCAGgtatggttgc ... tctttttcagGGTTTGGATGATCAAAATGGAAATGGTACACCTAGTTTGCCAGTTTCTGAT