1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTATCTCAAGAGAGGAGTTTGTAAGTGTTGTATGCGATGCCCTCTCTTTGTACAAGTATGTTGGACCCAACCAGAAAGCAGACCTGCTCCTCGCTTGCAGgtaaaataaacttgcttatcactgtatttcttaatccgcacgaatttaaacgataacatatatctgtccatttaatgcacatgtccatcacatcaatttc...
species | Zea mays |
transcript | GRMZM2G123544_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TACAAGTATGTTGGACCCAACCAGAAAGCAGACCTGCTCCTCGCTTGCAG AATTAAAGAGAGAAAGGAATCGGTGACAATACTCTTGTGTGGGACAAGCGGEST: gi|30705584|gb|CD058831.1|CD058831
genomic: TACAAGTATGTTGGACCCAACCAGAAAGCAGACCTGCTCCTCGCTTGCAGgtaaaataaa ... ttccgatcagAATTAAAGAGAGAAAGGAATCGGTGACAATACTCTTGTGTGGGACAAGCGG
EST: TACAAGTATGTTGGACCCAACCAGAAAGCAGACCTGCTCCTCGCTTGCAG AATTAAAGAGAGAAAGGAATCGGTGACAATACTC
genomic: TACAAGTATGTTGGACCCAACCAGAAAGCAGACCTGCTCCTCGCTTGCAGgtaaaataaa ... ttccgatcagAATTAAAGAGAGAAAGGAATCGGTGACAATACTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTATCTCAAGAGAGGAGTTTGTAAGTGTTGTATGCGATGCCCTCTCTTTGTACAAGTATGTTGGACCCAACCAGAAAGCAGACCTGCTCCTCGCTTGCAGgtaaaataaacttgcttatcactgtatttcttaatccgcacgaatttaaacgataacatatatctgtccatttaatgcacatgtccatcacatcaatttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC