1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGAATCATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctactgctatgccttctcatctgtccccttatgttgccaaatgtatcattattgacagatgtcctccattgaactaactgaatgcttttttaca...
species | Zea mays |
transcript | GRMZM2G115757_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGT GGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGACEST: gi|32936362|gb|CF041181.1|CF041181
genomic: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctac ... ttttttacagGGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
EST: GGTGACAAGGTTAAAGTTCACTACCGT GGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGACEST: gi|32868577|gb|CF008259.1|CF008259
genomic: GGTGACAAGGTTAAAGTTCACTACCGTgtaagtctac ... ttttttacagGGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
EST: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGT GGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGACEST: gi|211322569|gb|FL457011.1|FL457011
genomic: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctac ... ttttttacagGGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
EST: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGT GGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGACEST: gi|33095696|gb|CF055690.1|CF055690
genomic: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctac ... ttttttacagGGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
EST: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGT GGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGACEST: gi|33095201|gb|CF055195.1|CF055195
genomic: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctac ... ttttttacagGGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
EST: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGT GGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
genomic: CATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctac ... ttttttacagGGAAAACTTACTGATGGAACGGTTTTTGATTCAAGCTATGAAAGAGGTGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAATCATGCAGCATTCAAGCTCACAAAGGTGACAAGGTTAAAGTTCACTACCGTgtaagtctactgctatgccttctcatctgtccccttatgttgccaaatgtatcattattgacagatgtcctccattgaactaactgaatgcttttttaca
- - - - - - - - CAAGCT
- - - - - - - - - AGCTCA