Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag

Basic information

species Zea mays
transcript GRMZM2G110378_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os05g01600.1 (Oryza sativa), 5'ss of exon 2
------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcag-ccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag
            |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |     |  |  |   |   | |  || | || |     |  |  | |||   |         ||||  | ||| ||  | || | |||
CTCTTCTGTAGGAAATGGCTGACGGTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAGgtctgattttctttttcttttttactcttacgtaatgtaatgtatgtcgtctcctgctgaatattacattacat-tacatttca-tcatgtag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os05g01600.2 (Oryza sativa), 5'ss of exon 2
-AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtc-agccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag
 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||       |  |  |   |   | |  || | || |     |  |  | |||   |         ||||  | ||| ||  | || | |||
GAAATGGCTGACGGTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAGgtctgattttctttttcttttttactcttacgtaatgtaatgtatgtcgtctcctgctgaatattacattacat-tacatttca-tcatgtag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA04G39380.2 (Glycine max), 5'ss of exon 2
------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagcccccc-----ctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactct-tctag
            | |||||||||| |||||| || || || |||||||| |||||||| ||||||||||| ||||| ||  |         ||  |  | |     || |  || | |  |  ||   || |   |||   || | |||| | ||   |   || | |  ||
TAGTTTGGTAAAAGATGGCTGATGCTGAGGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTGAAGgttagtactttgcagtttcttctgttatgtgtaattgcatctat-tagtctcggtttcgt-tatcaaacgatttatttctataatgatctgtgtacag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA15G05570.1 (Glycine max), 5'ss of exon 2
--------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcag------ccccccc----------tcccccctg-acccccaacttgatttgtacaacct-tattt-ccaagtatgc--cactaattatg----tgtaccttctactcttctag----------
        | |||||||||| ||||||||| || ||||||||    || ||||| ||||||||||||||||| ||           ||          |    | ||  ||    |       ||| ||  || |  || |  ||||| |     ||| ||||    ||     | || | |||| |          
GTTTTAAAAGATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAATGGAACTGGAATGGTCAAGgttagaagatgttttgccaattgatgagtgtttcttgtgccattgaagaagactgttcactctgtgcttgcttagtattcattgttaaatatgatattgatatatatatttttctcgatgtttgcag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA05G32220.1 (Glycine max), 5'ss of exon 1
--------------------------------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttg---atttgtacaacc-ttatttccaagtatgccactaattatgtgtaccttctactcttctag
                                      | ||||| |||| |||||| || || || ||||| || |||||||| ||||||||||||||||| ||  |     |  |  ||         |       |||| || |   ||      |||     ||| | | | ||    |  ||     |   
TATTTCATGGCACCCTATGCTTTTTGCAGGTTTGTAAAAGATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTCAAGgttagtacttag-cggctttgttttttgtttcatgtgcttgtgcatctgctagccttgagttcataactgaatctttgattttaatatggaacag-

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA08G15480.1 (Glycine max), 5'ss of exon 2
---------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag
         | ||||| ||||  ||||| || || || ||||| ||||||||||| ||||||||||||||||| ||  |  | |      |          |  || || | |     | |    |||     | | | ||  | ||  ||    |     ||
GTTTGTAAAAGATGGCAGATGCCGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTCAAGgttagtacttcgtggatttttgtttt--gttgcatgtgcata-tgcaagtcttgagttcataagtgaata-atttattttaatatggaacag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA04G39380.1 (Glycine max), 5'ss of exon 2
---------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagcccccc-----ctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactct-tctag
         | |||||||||| |||||| || || || |||||||| |||||||| ||||||||||| ||||| ||  |         ||  |  | |     || |  || | |  |  ||   || |   |||   || | |||| | ||   |   || | |  ||
TTTGGTAAAAGATGGCTGATGCTGAGGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTGAAGgttagtactttgcagtttcttctgttatgtgtaattgcatctat-tagtctcggtttcgt-tatcaaacgatttatttctataatgatctgtgtacag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA06G15520.2 (Glycine max), 5'ss of exon 2
---------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacc--cccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactct-tctag
         |||||||||||| |||||| || || || ||||| || |||||||| ||||||||||| ||||| ||  |          ||         || |  || | |  |  |||  || ||  |||  | | | |||| |  |   ||  || | |  ||
TTTGGTAAAAAATGGCTGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGgttagtactttgcagtttcttgttagtgtaattgcatctatttagtcttggtttcat-tattgctcaatttatttaaatgatcatctgtgtacag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA05G32220.2 (Glycine max), 5'ss of exon 2
---------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttg---atttgtacaacc-ttatttccaagtatgccactaattatgtgtaccttctactcttctag
         | ||||| |||| |||||| || || || ||||| || |||||||| ||||||||||||||||| ||  |     |  |  ||         |       |||| || |   ||      |||     ||| | | | ||    |  ||     |   
GTTTGTAAAAGATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTCAAGgttagtacttag-cggctttgttttttgtttcatgtgcttgtgcatctgctagccttgagttcataactgaatctttgattttaatatggaacag-

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA08G19420.1 (Glycine max), 5'ss of exon 2
--------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccac-taattatgtgtaccttctactcttctag----------------------
        |||||||||||| ||||||||| || ||||||||    || ||||| ||||||||||||||||| ||  |    |    ||        |       |||| | |    | |    |||  ||    |  ||   |  |  |  || |  | ||                       
GTTTTAAAAAATGGCTGATGCTGAGGACATTCAACCTCTTGTTGTTGATAATGGAACTGGAATGGTCAAGgttagaacatgttttttccaattgatgagtgcttcttgtgctattgaagtagacagttcgctctgtgcttgcttaaatatgatattaatatatattttttctccaatgtttgcag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: AT1G49240.1 (Arabidopsis thaliana), 5'ss of exon 2
--------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctccc---ccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag
          ||||| |||| ||| ||||| || ||| ||||||| |||||||| ||||||||||| ||||| || | |  ||  |   |  | |       ||| ||||   |||  ||   | |||||   ||  |    |                      
ATCGTAGACCATGGCCGATGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAAGgttagtctcttctttcttactttaaggattctcttaattttggcaagatttgatacaagt--tcctttgtgcag---------------------

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: AT5G09810.1 (Arabidopsis thaliana), 5'ss of exon 2
----AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatt-tccaagtatgccactaattat-gtgtaccttctactcttctag
    ||||||| ||||||||||| || ||||| |||||||| |||||||| ||||||||||| ||||| ||     |        |     |    | | | |   |  | || || | || || |   |||| | ||  ||    || ||   |   ||
TGAAAAATGGCCGATGGTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGgtgagttagactgtttatttagatactgtatggttctaaccttctttgttgtacatgtgtaagactactgatcatgatttttgtatattaacag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 3
---------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccc--cctgaccccca-acttgatttgtacaaccttatttc-caagtatgccact-aattatgtgtaccttctactcttctag------
           ||||| |||  ||| || |||||||| || ||||| |||||||| ||||||||||| |||||| |      ||  |   | |||    || | ||| | |||       |  | | ||| |   | | |  | || |  | || | |  |  | ||       
GTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAGgtctgttgtttctttcttgcttgatatgcagatttgttgtgttgtttgctgctcctcaaatgctcaatttgaataagctttccatgttatgctttatatgcag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: Vv12s0178g00200.t01 (Vitis vinifera), 5'ss of exon 1
----------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgaccccca--acttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactct---tctag---
          | ||||| ||||  ||||| |||||||||||||| || |||||||| |||||||||||||||||  | |     | |    | |   | |  | || || |||       |         ||    |     | |  | |  ||  |   |   | |     
AGGTTTTAGAAGATGGCCGATGCCGAGGATATCCAGCCTCTTGTGTGTGACAATGGAACTGGAATGGTCAAGgtttgtcagttattcttatttatttcaatgagttcatatgtttgtgtctgcacttgtttagataaagggctttagggattttacaaaatgaatttgactc

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: PP1S372_38V6.3 (Physcomitrella patens), 5'ss of exon 2
-----------------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag----------------------------------------------------------------------------------------
                         |||||||||||||||||  |||||||| | || |||||||||||| |||||||||| |||||  ||   |   || |    |    | |||  | || | | |    | |  | || |||| |  |||   |  |  | | | ||    ||                                                                                         
TGGTTGAGCAGGTCCAAACTAAACCATGGCTGATGGTGAGGAAGTCCAGCCTTTGGTGTGCGACAATGGCTCTGGAATGGTTAAGgtatgcatgcttaccgc----atatacgactgtaattctcccatgcaaat--cgagcatgctaacaatcgcgccttgcatttgctaaggtacattgtctgatcaatcatagtactatatacatatcggtcctctgcataatgcgcaaaatctgaaattaggtctggtttatttggcgcag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: PP1S372_38V6.1 (Physcomitrella patens), 5'ss of exon 2
----------------------------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag----------------------------------------------------------------------------------------
                                    |||||||||||||||||  |||||||| | || |||||||||||| |||||||||| |||||  ||   |   || |    |    | |||  | || | | |    | |  | || |||| |  |||   |  |  | | | ||    ||                                                                                         
GTGTTGCAAAGTGGTTGAGCAGGTCCAAACTAAACCATGGCTGATGGTGAGGAAGTCCAGCCTTTGGTGTGCGACAATGGCTCTGGAATGGTTAAGgtatgcatgcttaccgc----atatacgactgtaattctcccatgcaaat--cgagcatgctaacaatcgcgccttgcatttgctaaggtacattgtctgatcaatcatagtactatatacatatcggtcctctgcataatgcgcaaaatctgaaattaggtctggtttatttggcgcag

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: PP1S337_21V6.2 (Physcomitrella patens), 5'ss of exon 3
------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag-----------
            |||||||||| ||||||||  | |||||  | || ||||||||||| ||||||||||||||||| ||  | | || |      ||||  |  || | || | | | |||  |||   | ||  ||   ||| | |   | |     ||| ||             
GTCGGTATTAAGAAATGGCTGACGGTGAGGAAGTACAGCCCTTGGTGTGCGACAATGGAACTGGAATGGTCAAGgtgaggtcactcttcta--aaacccagagattaacttttccgaacttggttcattggat-tcaaggattctataatcttgagcttctgctgaaaaatattcta

upper sequence: GRMZM2G110378_T01 (Zea mays), 5'ss of exon 2
lower sequence: PP1S372_38V6.4 (Physcomitrella patens), 5'ss of exon 2
------------AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccccctcccccctgacccccaacttgatttgtacaaccttatttccaagtatgccactaattatgtgtaccttctactcttctag----------------------------------------------------------------------------------------
              |||||||||||||||||  |||||||| | || |||||||||||| |||||||||| |||||  ||   |   || |    |    | |||  | || | | |    | |  | || |||| |  |||   |  |  | | | ||    ||                                                                                         
GTCCAAACTAAACCATGGCTGATGGTGAGGAAGTCCAGCCTTTGGTGTGCGACAATGGCTCTGGAATGGTTAAGgtatgcatgcttaccgc----atatacgactgtaattctcccatgcaaat--cgagcatgctaacaatcgcgccttgcatttgctaaggtacattgtctgatcaatcatagtactatatacatatcggtcctctgcataatgcgcaaaatctgaaattaggtctggtttatttggcgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211516001|gb|FL388522.1|FL388522
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211452566|gb|FL415950.1|FL415950
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211164899|gb|FL418744.1|FL418744
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211471831|gb|FL184447.1|FL184447
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAT                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211124849|gb|FL412683.1|FL412683
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211299145|gb|FL410209.1|FL410209
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211387768|gb|FL407614.1|FL407614
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|31664625|gb|CD573558.1|CD573558
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211341208|gb|FL389714.1|FL389714
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211268711|gb|FL388749.1|FL388749
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|84980900|gb|DW531249.1|DW531249
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|149030164|gb|EE286304.2|EE286304
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211376382|gb|FL377802.1|FL377802
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211284696|gb|FL423649.1|FL423649
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211229696|gb|FL389661.1|FL389661
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211403088|gb|FL391557.1|FL391557
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|148958180|gb|EC904384.2|EC904384
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211182856|gb|FL416584.1|FL416584
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211500044|gb|FL422951.1|FL422951
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211313498|gb|FL411483.1|FL411483
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211053703|gb|FL374494.1|FL374494
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211068381|gb|FL392619.1|FL392619
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|20507126|gb|BQ279497.1|BQ279497
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211205019|gb|FL417061.1|FL417061
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211508684|gb|FL378810.1|FL378810
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211504112|gb|FL386329.1|FL386329
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211403055|gb|FL390171.1|FL390171
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211468703|gb|FL380608.1|FL380608
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211158138|gb|FL392766.1|FL392766
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211464407|gb|FL419838.1|FL419838
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211481817|gb|FL383625.1|FL383625
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211156552|gb|FL393684.1|FL393684
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|23357755|gb|BU645404.1|BU645404
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211400747|gb|FL407096.1|FL407096
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211024386|gb|FL370323.1|FL370323
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211054598|gb|FL410434.1|FL410434
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATKGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211317277|gb|FL392926.1|FL392926
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|32935177|gb|CF039989.1|CF039989
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211379001|gb|FL369256.1|FL369256
EST:     GTGAGGACATCCAGCCTCTTGTCTGCKACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211410710|gb|FL390210.1|FL390210
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|50324857|gb|CO519983.1|CO519983
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211437153|gb|FL418509.1|FL418509
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211526944|gb|FL381048.1|FL381048
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|5566829|gb|AI881695.1|AI881695
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211137665|gb|FL400354.1|FL400354
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211051966|gb|FL423476.1|FL423476
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211413674|gb|FL415013.1|FL415013
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211528104|gb|FL426881.1|FL426881
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211147504|gb|FL408666.1|FL408666
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211062879|gb|FL385121.1|FL385121
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211502488|gb|FL420287.1|FL420287
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211482178|gb|FL056140.1|FL056140
EST:     GTGAGGACATCCAGCCTCTTRTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211134847|gb|FL400319.1|FL400319
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211176402|gb|FL404378.1|FL404378
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211053781|gb|FL378940.1|FL378940
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAA                         GCTGGTTTTGCTKGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|22473316|gb|BU037796.1|BU037796
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211487937|gb|FL056167.1|FL056167
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTATT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211328549|gb|FL425847.1|FL425847
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGATTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGG-TTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGT
EST: gi|211124911|gb|FL425298.1|FL425298
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211389934|gb|FL388841.1|FL388841
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211048688|gb|FL410402.1|FL410402
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|148969649|gb|EE020509.2|EE020509
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211303043|gb|FL387479.1|FL387479
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211321964|gb|FL423211.1|FL423211
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211538765|gb|FL372746.1|FL372746
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211236775|gb|FL420044.1|FL420044
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211199201|gb|FL385611.1|FL385611
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211485061|gb|FL056160.1|FL056160
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211324182|gb|FL424994.1|FL424994
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211039266|gb|FL377572.1|FL377572
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211408160|gb|FL390197.1|FL390197
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|22520597|gb|BU079408.1|BU079408
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211063600|gb|FL411765.1|FL411765
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|211134621|gb|FL369503.1|FL369503
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|17921916|gb|BM259567.1|BM259567
EST:     GTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT
EST: gi|20208181|gb|BQ134270.1|BQ134270
EST:     GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAG                         GCTGGTTTTGCTGGCGACGATGCACCATGGGCTGTTTTCCCTAGTATTGTT
genomic: GTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 102

AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTTGGCCGTCCTCGCCACACTGGTGTTATGGTAGGGATGGGACAGAAGGATG


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 45

AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTTGGCCGTCCTCGCCACACTGGTGTTATGGTAGGGATGGGACAGAAGGATG


Block sizes: 46 (upstream exon), 49 (downstream exon)
Score: 52

AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTTGGCCGTCCTCGCCACACTGGTGTTATGGTAGGGATGGGACAGAAGGATG


Block sizes: 45 (upstream exon), 49 (downstream exon)
Score: 44

AAATGGCTGATGGTGAGGACATCCAGCCTCTTGTCTGCGACAATGGCACTGGAATGGTCAAGgtcagccccc ... actcttctagGCTGGTTTTGCTGGCGACGATGCACCAAGGGCTGTTTTCCCTAGTATTGTTGGCCGTCCTCGCCACACTGGTGTTATGGTAGGGATGGGACAGAAGGATG