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AGGGACGACATGGAGGTGCTTGACGAGCCTCTCTACGCAAATTTCCTGCGTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcggcaccatgcttaacttgcagttcgaatttcccggaactacggcttgtttcaactagtgaggtggttggcagacggggaactaattttttg...
species | Zea mays |
transcript | GRMZM2G108416_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATG GACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGACEST: gi|211222333|gb|FL205469.1|FL205469
genomic: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcg ... tctggtgcagGACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
EST: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATG GACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGACEST: gi|71332464|gb|DR803192.1|DR803192
genomic: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcg ... tctggtgcagGACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
EST: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATG GACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGACEST: gi|211222335|gb|FL205471.1|FL205471
genomic: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcg ... tctggtgcagGACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
EST: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATG GACCCTGATGGAAACAAGGTTGTCAAAGAGGTGATTTTTGGACCAGGGGACEST: gi|149084135|gb|EE173538.2|EE173538
genomic: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcg ... tctggtgcagGACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
EST: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATG GACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGACEST: gi|211222331|gb|FL205467.1|FL205467
genomic: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcg ... tctggtgcagGACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
EST: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATG GACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
genomic: GTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcg ... tctggtgcagGACCCTGATGGAAATAAGGTTGTCAAGGAGGTGATTTTTGGCCCAGGGGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGGACGACATGGAGGTGCTTGACGAGCCTCTCTACGCAAATTTCCTGCGTGCCACAGGCGTCGACAGGCCCTACCGGCAGGAGCTCCTGTCCAAAATGgtgagattcggcaccatgcttaacttgcagttcgaatttcccggaactacggcttgtttcaactagtgaggtggttggcagacggggaactaattttttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT