1 5' 3' | 2 5' 3' | 3 5' 3' |
CTCCAGGAAGCAAGAAGGTTCAAACACTCTTAGCAGCTCTCCTGATACTAACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgacatcttttggattctcctagaagcaaaataagtttatatgtttgaggttttttttaccttgtttatttatgtgttatctcatgtattag
species | Zea mays |
transcript | GRMZM2G104255_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|29945793|gb|CB815822.1|CB815822
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|93282287|gb|EB674551.1|EB674551
genomic: ATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|76281047|gb|DV020615.1|DV020615
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|76281086|gb|DV020654.1|DV020654
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ACAATGGACTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|32931137|gb|CF035949.1|CF035949
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|76281048|gb|DV020616.1|DV020616
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCCEST: gi|71307077|gb|DR789706.1|DR789706
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
EST: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAG GACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
genomic: ACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgac ... catgtattagGACTTGGCTGGAGAGGCTGATGCTGATAATCATTATAATAATGATGATGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCAGGAAGCAAGAAGGTTCAAACACTCTTAGCAGCTCTCCTGATACTAACAATGGAGTTCATCCCTCAAATTCTGAAGGATTTAAAGGTTTTCTTGAGgtctgctgacatcttttggattctcctagaagcaaaataagtttatatgtttgaggttttttttaccttgtttatttatgtgttatctcatgtattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG