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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct...

Basic information

species Zea mays
transcript GRMZM2G102471_T05
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G102471_T05 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os04g57220.1 (Oryza sativa), 5'ss of exon 2
GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcg-tccgtgtgtgcttgagttgtaggttggtgtct
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||| |||  ||| ||  | ||||||||||| | |||   ||||||||  |  || | |  ||||| | ||  ||||    || |   ||
GGTTTGATCGATGGCGTCCAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCATGCAGCGCAGgtgatttgatctctatcgccttggatttcgcccagatcttgccggattcgattgcgatgaacgtgttggtttgtgtg-gtttctgttgcgttttagatgct

upper sequence: GRMZM2G102471_T05 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os04g57220.3 (Oryza sativa), 5'ss of exon 1
--------------------GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcg-tccgtgtgtgcttgagttgtaggttggtgtct
                    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||| |||  ||| ||  | ||||||||||| | |||   ||||||||  |  || | |  ||||| | ||  ||||    || |   ||
TGTTTTGTGGGGGTGATTAGGGTTTGATCGATGGCGTCCAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCATGCAGCGCAGgtgatttgatctctatcgccttggatttcgcccagatcttgccggattcgattgcgatgaacgtgttggtttgtgtg-gtttctgttgcgttttagatgct

upper sequence: GRMZM2G102471_T05 (Zea mays), 5'ss of exon 2
lower sequence: Vv19s0015g01190.t01 (Vitis vinifera), 5'ss of exon 2
-----------------GGTTTGATC---GATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtga---tttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcga-tgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct
                  | |  |||    ||||| || ||| | ||    ||||||||||||||||||||||||||||| ||||| || ||||| || |||     | ||   |||     |||  ||| |   ||  ||     |  |  | || |   | |  | |      |  | | || || |   |   ||      
CAACTGTATTGAAACTTTGGTCAATCTGTAATGGCTTCAAAGCGAATTAACAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttctatcttctccttttctcctttttaatcaattcaatttgtttcttatttcatctccttctggaactggcatttcctagaatctcaatctgcc----

upper sequence: GRMZM2G102471_T05 (Zea mays), 5'ss of exon 2
lower sequence: EDO98738 (Chlamydomonas reinhardtii), 5'ss of exon 2
-----------GGTTTGATCGATGGCGT-CGAAGAGGATCCTGAAGGAGTTGAAGG-----ACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct------
           ||      | |   ||| |   | ||  ||||  || | |||        ||  ||||  |   |    |   || |   ||   |||||    ||||     |  | |  | | ||  ||  |  ||  | | |     |||   |  ||  | | |      ||   |   ||  ||  ||||       
GACCTGCAGAAGGACCCGCCCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgcagcggttcgtctggcctgggtgacgcgctct-----gggcagagtcgcgtataggcccagcccagtcgcagaacgacctgtgcggtgactgaa---actgacgccctaacttcctgtccttatag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211235968|gb|FL033340.1|FL033340
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340925|gb|FL033475.1|FL033475
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCRG                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238219|gb|FL033365.1|FL033365
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211242685|gb|FL033392.1|FL033392
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211251624|gb|FL033454.1|FL033454
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343325|gb|FL033497.1|FL033497
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238220|gb|FL033366.1|FL033366
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32801264|gb|CD953500.1|CD953500
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340926|gb|FL033476.1|FL033476
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGC-R                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211235970|gb|FL033342.1|FL033342
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32915121|gb|CF019933.1|CF019933
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGC
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGC
EST: gi|211244919|gb|FL033406.1|FL033406
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211247162|gb|FL033427.1|FL033427
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGGCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211251618|gb|FL033448.1|FL033448
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343326|gb|FL033498.1|FL033498
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         -TNCCTGTTGGTGAGGACATGTTCCATTGGGCAAGCNACCATCATGGGGCC
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGT-CCTGTTGGTGAGGACATGTTCCATTGG-CAAGCGACCATCATGGGGCC
EST: gi|211338539|gb|FL033471.1|FL033471
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|8367043|gb|BE049988.1|BE049988
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211062662|gb|FL033335.1|FL033335
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCRG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|19057772|gb|BM736439.1|BM736439
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343318|gb|FL033490.1|FL033490
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343322|gb|FL033494.1|FL033494
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         WTACMCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCC
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGT-C-CTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCC
EST: gi|32802365|gb|CD954601.1|CD954601
EST:     GAGGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|8367395|gb|BE050340.1|BE050340
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340936|gb|FL033486.1|FL033486
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCYATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|87152240|gb|DY397029.1|DY397029
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211062665|gb|FL033338.1|FL033338
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211338541|gb|FL033473.1|FL033473
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|15005359|gb|BI325426.1|BI325426
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211338533|gb|FL033465.1|FL033465
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211249388|gb|FL033433.1|FL033433
EST:     GAAGGAGTTGAAGGACMTGCAGAAGGACCCGCCCACCTCCTGCAGCG-AG                         KTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32801414|gb|CD953650.1|CD953650
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32803451|gb|CD955687.1|CD955687
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240460|gb|FL033382.1|FL033382
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGC-N                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCKACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340931|gb|FL033481.1|FL033481
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32803890|gb|CD956126.1|CD956126
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240462|gb|FL033384.1|FL033384
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343332|gb|FL033504.1|FL033504
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240450|gb|FL033372.1|FL033372
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32801349|gb|CD953585.1|CD953585
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211244923|gb|FL033410.1|FL033410
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGNTGGTGAGGACATGGTCCATTGGNAAGGGAC-ATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211235972|gb|FL033344.1|FL033344
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGC-R                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240448|gb|FL033370.1|FL033370
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211244927|gb|FL033414.1|FL033414
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAR                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211345710|gb|FL033505.1|FL033505
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCRG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32798360|gb|CD950596.1|CD950596
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32823799|gb|CD963521.1|CD963521
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340938|gb|FL033488.1|FL033488
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211249398|gb|FL033443.1|FL033443
EST:     GAAGGAGTTGAAGGACCTGCAGAARGACCCGCCCACCTCCTGCAGCGCRT                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340929|gb|FL033479.1|FL033479
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCRT                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211242691|gb|FL033398.1|FL033398
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGGCCT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGG-CCT
EST: gi|211249393|gb|FL033438.1|FL033438
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31628504|gb|CD526640.1|CD526640
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGGGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343330|gb|FL033502.1|FL033502
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|6826976|gb|AW330619.1|AW330619
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATT
EST: gi|211338540|gb|FL033472.1|FL033472
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238218|gb|FL033364.1|FL033364
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211242690|gb|FL033397.1|FL033397
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211251615|gb|FL033445.1|FL033445
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343321|gb|FL033493.1|FL033493
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|20301187|gb|BQ164130.1|BQ164130
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211249395|gb|FL033440.1|FL033440
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACCTCCTGCAGCGC-R                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240454|gb|FL033376.1|FL033376
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|31628261|gb|CD526521.1|CD526521
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211247156|gb|FL033421.1|FL033421
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         TTNCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGT-CCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCT
EST: gi|211338538|gb|FL033470.1|FL033470
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343319|gb|FL033491.1|FL033491
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343323|gb|FL033495.1|FL033495
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGC--                         NTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238213|gb|FL033359.1|FL033359
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343328|gb|FL033500.1|FL033500
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|18963462|gb|BM660448.1|BM660448
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|9794732|gb|BE553040.1|BE553040
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343320|gb|FL033492.1|FL033492
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211251623|gb|FL033453.1|FL033453
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|32802630|gb|CD954866.1|CD954866
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240452|gb|FL033374.1|FL033374
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211235976|gb|FL033348.1|FL033348
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGAN-ATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211235974|gb|FL033346.1|FL033346
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|28987119|gb|CB351473.1|CB351473
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340933|gb|FL033483.1|FL033483
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211249387|gb|FL033432.1|FL033432
EST:     GAAGGAGTTGAAGGACCWGCAGAAGGACCCGCMCACCTCCTGCAGCGCAG                         -TCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240455|gb|FL033377.1|FL033377
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238217|gb|FL033363.1|FL033363
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240451|gb|FL033373.1|FL033373
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340927|gb|FL033477.1|FL033477
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211340928|gb|FL033478.1|FL033478
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGMCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211343331|gb|FL033503.1|FL033503
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|78084134|gb|DV512527.1|DV512527
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTC
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211251617|gb|FL033447.1|FL033447
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211242679|gb|FL033386.1|FL033386
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|30591287|gb|CD052297.1|CD052297
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211338542|gb|FL033474.1|FL033474
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGC-R                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|78105419|gb|DV523837.1|DV523837
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAG
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAG
EST: gi|211340935|gb|FL033485.1|FL033485
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240458|gb|FL033380.1|FL033380
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCVCCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211247159|gb|FL033424.1|FL033424
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211244914|gb|FL033401.1|FL033401
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211249390|gb|FL033435.1|FL033435
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCA-                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211247163|gb|FL033428.1|FL033428
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238210|gb|FL033356.1|FL033356
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         -TNCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGT-CCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCT
EST: gi|20300917|gb|BQ163860.1|BQ163860
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211240456|gb|FL033378.1|FL033378
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211238214|gb|FL033360.1|FL033360
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAG                         GTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCAT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
EST: gi|211247151|gb|FL033416.1|FL033416
EST:     GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCRG                         TTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT
genomic: GAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2177

GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1695

GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1285

GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2148

GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttact ... taattgtcagGTCCTGTTGGTGAGGACATGTTCCATTGGCAAGCGACCATCATGGGGCCTTCGGACAGCCCATTTGCAGGTGGGGTATTCTTGGTGAACATTCACTTCCC


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTTTGATCGATGGCGTCGAAGAGGATCCTGAAGGAGTTGAAGGACCTGCAGAAGGACCCGCCCACCTCCTGCAGCGCAGgtgatttactctctagcgctctggtttgtgtccagatcttgcggaattgtgttgcgatgcgcccgtcgtccgtgtgtgcttgagttgtaggttggtgtct

- - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG