1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGGTTACATAGATGAAAATGTCAGGGTTGGGCTGAAGTCACTGCCTGTTGCAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTTgtgagtggaaacgttgttcagtaattttcatgctcacttgatcagtaccttttcattatatgcatggaaacatgagaaattgtctactaacatggtgtac...
species | Zea mays |
transcript | GRMZM2G099754_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTT ACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTGEST: gi|6564164|gb|AW231786.1|AW231786
genomic: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTTgtgagtggaa ... tttatgtcagACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTG
EST: CAGAGAATGGCTT ACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTGEST: gi|148932539|gb|EC876345.2|EC876345
genomic: CAGAGAATGGCTTgtgagtggaa ... tttatgtcagACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTG
EST: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTT ACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTGEST: gi|67032695|gb|CO461444.1|CO461444
genomic: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTTgtgagtggaa ... tttatgtcagACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTG
EST: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTT ACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTGEST: gi|6637068|gb|AW261340.1|AW261340
genomic: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTTgtgagtggaa ... tttatgtcagACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTG
EST: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTT ACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTG
genomic: CAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTTgtgagtggaa ... tttatgtcagACCGAGGTTAACTGCCTGGGGCAGTTGAGGCATCCAAATTTGGTGAAGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTTACATAGATGAAAATGTCAGGGTTGGGCTGAAGTCACTGCCTGTTGCAGTCAAGGTGCTCAACAAAGATGGACATCAAGGGCACAGAGAATGGCTTgtgagtggaaacgttgttcagtaattttcatgctcacttgatcagtaccttttcattatatgcatggaaacatgagaaattgtctactaacatggtgtac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA