1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TACTACACCTCCACGCTGCTCGCCGGCGCCTACCGCGCGCCGCACCCCGTCACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctacgcctacgcgacgcacggctccacgtccgtccgtctcgtcttagctaactgaccgcggtgccctgaacatgcgtacgtcgtcgcag
species | Zea mays |
transcript | GRMZM2G096407_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCA GTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGGEST: gi|148939591|gb|EC884211.2|EC884211
genomic: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctac ... gtcgtcgcagGTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
EST: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCA GTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGGEST: gi|74241093|gb|DT649007.1|DT649007
genomic: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctac ... gtcgtcgcagGTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
EST: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATTGTACCTCA GTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGGEST: gi|148991824|gb|EE033411.2|EE033411
genomic: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctac ... gtcgtcgcagGTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
EST: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCA GTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGGEST: gi|76013340|gb|DT940510.1|DT940510
genomic: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctac ... gtcgtcgcagGTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
EST: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCA GTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGGEST: gi|101393258|gb|EB818560.1|EB818560
genomic: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctac ... gtcgtcgcagGTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
EST: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCA GTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
genomic: CACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctac ... gtcgtcgcagGTCCCAGGGAGGTGTTCATGTGCGGGGTCGCGCAGTACGTGAACCTGTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACTACACCTCCACGCTGCTCGCCGGCGCCTACCGCGCGCCGCACCCCGTCACCGGCCACAGGAACCGCACCTACATGGACGCCGTCAGATCGTACCTCAgtacgcctacgcctacgcgacgcacggctccacgtccgtccgtctcgtcttagctaactgaccgcggtgccctgaacatgcgtacgtcgtcgcag
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