1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACGATGGCTTTCGAATGAATGATGTTCTTGTTTCTCTATGGTACATTATGGGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatcagtttgtatcggatcagttttttgccccctagatataaacatgaaattttaggaatttgggaagtatcggatcaagattcaaacaacttca...
species | Zea mays |
transcript | GRMZM2G091245_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAG TTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGGEST: gi|32840982|gb|CD980663.1|CD980663
genomic: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatca ... tgtattgcagTTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
EST: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAG TTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGGEST: gi|76294303|gb|DV033871.1|DV033871
genomic: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatca ... tgtattgcagTTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
EST: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAG TTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGGEST: gi|32840712|gb|CD980393.1|CD980393
genomic: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatca ... tgtattgcagTTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
EST: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAG TTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGGEST: gi|149059933|gb|EE157060.2|EE157060
genomic: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatca ... tgtattgcagTTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
EST: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAG TTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGGEST: gi|32840815|gb|CD980496.1|CD980496
genomic: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatca ... tgtattgcagTTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
EST: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAG TTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
genomic: GGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatca ... tgtattgcagTTCCAAAAGCAAGATTCCTGTGTGGCCATTCCTGGTTCTTTCATGCATCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGATGGCTTTCGAATGAATGATGTTCTTGTTTCTCTATGGTACATTATGGGCCTCTGGCCACTAGTCTACAGTATGTTGCTCCTTCCTACTGGTAGAAGgtaagaatcagtttgtatcggatcagttttttgccccctagatataaacatgaaattttaggaatttgggaagtatcggatcaagattcaaacaacttca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caaacaac