1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGAGCGACCAGGTGAACCCGACTGCACTTACTATCTCAGGACTGGATTGTGTCGATTTGGCATGAGCTGCCGATTCAATCATCCTCCGGATAGGAATCTGgtgaatatccccgcctttccaaactgtgattatttgtcgtattgctttgaatcaccagatgttttttccattatccaatgtcattgttgttatgtacatt...
species | Zea mays |
transcript | GRMZM2G087032_T04 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTCGATTTGGCATGAGCTGCCGATTCAATCATCCTCCGGATAGGAATCTG GCTATTGCCTCTGC-AGAATGAAGGGAGAATATCCTGAGAGAGEST: gi|211485765|gb|FL084118.1|FL084118
genomic: GTCGATTTGGCATGAGCTGCCGATTCAATCATCCTCCGGATAGGAATCTGgtgaatatcc ... ttaattttagGCTATTGCCTCTGCCAGAATGAAGGGAGAATATCCTGAGAGAG
EST: GTCGATTTGGCATGAGCTGCCGATTCAATCATCCTCCGGATAGGAATCTG GCTATTGCCTCTGCCAGAATGAAGGGAGAATATCCTGAGAGAGCGGGACAG
genomic: GTCGATTTGGCATGAGCTGCCGATTCAATCATCCTCCGGATAGGAATCTGgtgaatatcc ... ttaattttagGCTATTGCCTCTGCCAGAATGAAGGGAGAATATCCTGAGAGAGCGGGACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGCGACCAGGTGAACCCGACTGCACTTACTATCTCAGGACTGGATTGTGTCGATTTGGCATGAGCTGCCGATTCAATCATCCTCCGGATAGGAATCTGgtgaatatccccgcctttccaaactgtgattatttgtcgtattgctttgaatcaccagatgttttttccattatccaatgtcattgttgttatgtacatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccgcc