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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCTCCTCGGAGTCATGTCTCTCATTATCTACACTGTGATTCTCCTTCCGTTGATAAAATATTGTTTTATTGTCCTGCGAGCTAATGATAACGGTGATGgtaagtaagtattgttacatacatcttctcatcacaacttcgactcttctagtatggctatataacaagtgtttttaagaactagacatgggatgaaggt...

Basic information

species Zea mays
transcript GRMZM2G084779_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G084779_T02 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os01g70490.1 (Oryza sativa), 5'ss of exon 2
GACCTCCTCGGAGTCATGTCTCTCATTATCTACACTGTGATTCTCCTTCCGTTGATAAAATATTGTTTTATTGTCCTGCGAGCTAATGATAACGGTGATGgtaagtaagtattgttacatacatcttctcatcacaacttcgactcttctagtatggctatataacaagtgtttttaagaactagacatgggatgaaggt------
||| |||| || || |||||||| ||||||||||||||| ||||||| || || |||||||| || || |||||  |  |||| ||||| || || |||||| ||| |  ||  || ||| |||||||  | ||||  |      |  |    | | |  |  ||||| |      ||||| ||  | |    || | |       
GACATCCTTGGTGTTATGTCTCTGATTATCTACACTGTGGTTCTCCTCCCATTAATAAAATACTGCTTCATTGTTTTAAGAGCAAATGACAATGGCGATGgtgagtgaacatcttt-cattcatcttcagaacacatgtatatggccacagagaagtccttcgaacaacta-----aagaattatgcttttattgcaagcagagtt