Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211260422|gb|FL227455.1|FL227455EST: AATCGCGGCTAATTGAGCGAGGAGAAAAATTTGGGGAGATATCTTTAAAG GCTCGCAAGACAATTGCAATGCTTAGTCAGGATTTTATTTATGATGGGTGN
genomic: AATCGCGGCTAATTGAGCGAGGAGAAAAATTTGGGGAGATATCTTTAAAGgttatccaca ... gttttttcagGCTCGCAAGACAATTGCAATGCTTAGTCAGGATTTTATTTATGATGGGTGT
EST:
gi|19058029|gb|BM736696.1|BM736696EST: AATCGCGGCTAATTGAGCCAGGAGAAAAATTTGGGGAGATATCTTTAAAG GCTCGCAAGACGATTGCAATGCTTAGTCAGGATTTTATTTATGATGGGTGT
genomic: AATCGCGGCTAATTGAGCGAGGAGAAAAATTTGGGGAGATATCTTTAAAGgttatccaca ... gttttttcagGCTCGCAAGACAATTGCAATGCTTAGTCAGGATTTTATTTATGATGGGTGT
EST:
gi|211260424|gb|FL227457.1|FL227457EST: AATCGCGNCTAATTGAGCGAGGAGAAAAATTTGGGGAGATATCTTTAAAG GCTCGCAAGACAATTG
genomic: AATCGCGGCTAATTGAGCGAGGAGAAAAATTTGGGGAGATATCTTTAAAGgttatccaca ... gttttttcagGCTCGCAAGACAATTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTTTGTAACGAGGACCTCACATCTGGAGCATGAGAAGTTTGATGCAGCAAAATCGCGGCTAATTGAGCGAGGAGAAAAATTTGGGGAGATATCTTTAAAGgttatccacatatccaaaactttccaattgttatctagtttctgtacaagaatttaatccttttgttcttatgcttcggggtcgtgttttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT