1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACTGGTGAGAGACATAAGCCGAATGCAGCAGAGCAACTACGGGAGGGAAGGATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaataaaccctagggccatagtctgtttccccaaacaatattggcatgagagtactcgagtagttcaaagattaattgaatttgctcatgtatag...
species | Zea mays |
transcript | GRMZM2G078508_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAG GTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCACEST: gi|211516147|gb|FL164991.1|FL164991
genomic: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaata ... tttcctgcagGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
EST: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAG GTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCACEST: gi|211516137|gb|FL164981.1|FL164981
genomic: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaata ... tttcctgcagGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
EST: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAG GTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCACEST: gi|211513792|gb|FL164975.1|FL164975
genomic: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaata ... tttcctgcagGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
EST: GATTCTCGCATATRACTGTSACAGGTGCTCTTGCTCACGGGACGAAGGAG GTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCACEST: gi|211513791|gb|FL164974.1|FL164974
genomic: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaata ... tttcctgcagGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
EST: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAG GTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCACEST: gi|211518499|gb|FL164993.1|FL164993
genomic: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaata ... tttcctgcagGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
EST: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAG GTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
genomic: GATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaata ... tttcctgcagGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGGTGAGAGACATAAGCCGAATGCAGCAGAGCAACTACGGGAGGGAAGGATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAGGAGgtgaggaataaaccctagggccatagtctgtttccccaaacaatattggcatgagagtactcgagtagttcaaagattaattgaatttgctcatgtatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG