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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGGAGAGGGTGCTCGACCCCAAGAAAGCACAGAACATCGCCATCCTGCTCCGTGCATTGAATGTTACGCGCGATGAGGTCTCTGATGCACTGTTGGATGgtgagtgtcactgcacttccccttgacccttgagccattgcagcgctgattttgttcgtttggataaatttcagtggccaatctttctcgctgaaaataa...

Basic information

species Zea mays
transcript GRMZM2G075921_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G075921_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os03g10680.1 (Oryza sativa), 5'ss of exon 2
GAGGAGAGGGTGCTCGACCCCAAGAAAGCACAGAACATCGCCATCCTGCTCCGTGCATTGAATGTTACGCGCGATGAGGTCTCTGATGCACTGTTGGATGgtgagtgtcactgcacttccccttgacccttgagccattgcagcgctgattttgttcgtttggataaatttcagtggccaatctttctcgctgaaaataa-----
|||||||||||||||||||||||||| || |||||||||||||||||||| || || |||||||| ||||| || |||||||| ||||||||||||||||||||||        | |||   ||    |||  | |||||||  | | |||  |        |||| | | ||       || ||| | | | | | ||      
GAGGAGAGGGTGCTCGACCCCAAGAAGGCGCAGAACATCGCCATCCTGCTGCGCGCGTTGAATGTCACGCGTGAGGAGGTCTCGGATGCACTGTTGGATGgtgagtact----tagttcagtttactgcttttgacattgcattgttaattcagcgtaccacgatagaat-catcatttcatttttgttggtaatagtagtcgct