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AGGTGCGCGGGAGGATCCGTTCGCGCCCGGAGGACCGGGATCCGGCGCCCGTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCATgtgagttccgaggctcctcctaatcctcctcctctgaccatctcgcggattcgaggctgctcgctgctgggttcggaatccctgctcgatcggccgcaat...
species | Zea mays |
transcript | GRMZM2G073571_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTCGTCGTCGACGCCCATGTCGGCCCACCTCGATCGCTTCGCGCGGCCAT GTTTTGAAGGGTGCTCAAGTCATGATGAACGTAGAGACCATAAGTCAGATTEST: gi|71443843|gb|DR824893.1|DR824893
genomic: GTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCATgtgagttccg ... aacctttcagGTTTTGAAGGGTGCTCAAGTCACGATGAACGTAGAGACCATAAGTCAGACT
EST: GTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCAT GTTTTGAAGGGTGCTCAAGTCACGATGAACGTAGAGACCATAAGTCAGACTEST: gi|211351459|gb|FL306915.1|FL306915
genomic: GTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCATgtgagttccg ... aacctttcagGTTTTGAAGGGTGCTCAAGTCACGATGAACGTAGAGACCATAAGTCAGACT
EST: GTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCAT GTTTTGAAGGGTGCTCAAGTCACGATGAACGTAGAGACCATAAGTCAGACT
genomic: GTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCATgtgagttccg ... aacctttcagGTTTTGAAGGGTGCTCAAGTCACGATGAACGTAGAGACCATAAGTCAGACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGTGCGCGGGAGGATCCGTTCGCGCCCGGAGGACCGGGATCCGGCGCCCGTCGTCGTCGACGCCCATGTCGGGCCACCTCGATCGCTTCGCGCGGCCATgtgagttccgaggctcctcctaatcctcctcctctgaccatctcgcggattcgaggctgctcgctgctgggttcggaatccctgctcgatcggccgcaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcctcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcctcc