Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211227913|gb|FL059245.1|FL059245EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGT
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTG-TGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGT
EST:
gi|71772807|gb|DR970732.1|DR970732EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGATAAAGGGAAGTTTCT
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGATAAAGGGAAGTTTCT
EST:
gi|211227911|gb|FL059243.1|FL059243EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGATAAAGGGAAGTT-CTCATGGCTGCTAGAAGATT-AGGCGTG
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGTG
EST:
gi|211227905|gb|FL059237.1|FL059237EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTTAGGCGT
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTT-AGGCGT
EST:
gi|211229973|gb|FL059252.1|FL059252EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGTG
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGTG
EST:
gi|211227912|gb|FL059244.1|FL059244EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGT
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAAGATTTAGGCGT
EST:
gi|211227918|gb|FL059250.1|FL059250EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGAT
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGAT
EST:
gi|211229972|gb|FL059251.1|FL059251EST: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTT CACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAA
genomic: GAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaa ... catctgacagCACCTGTGGATAAAGGGAAGTTTCTCATGGCTGCTAGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCAGGGCCAAGGGAGAGACCAATGCAGTGCTTTATCAAGAGGAATAAGAACAACTCTACATTCTACCTCTACCTTGGCTTCACAAGTTgtaagtagaagatatgacgtgtgcacctttttcatcgttaaatattgcacgatgtattctttcttatggaattctgcatttccacttccatacctaattg
- - - - - - - - - - - - - - - - - - - - - - AAGAAC