1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTCAAGAGCCTACGGGAGCAACATTGGAGGGTACAAGAATGAAGGGTTTGTTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGgtatccctactactgttgtgtctttctgatttcctcaaatgcaaaatctgccatttctataacatgcacattccacaccatattcacatttttctcattg...
species | Zea mays |
transcript | GRMZM2G068506_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAG GGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAATEST: gi|67026829|gb|CO455578.1|CO455578
genomic: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGgtatccctac ... tttttctcagGGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAAT
EST: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAG GGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAATEST: gi|78087487|gb|DV515880.1|DV515880
genomic: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGgtatccctac ... tttttctcagGGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAAT
EST: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAG GGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAATEST: gi|67037455|gb|CO464271.1|CO464271
genomic: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGgtatccctac ... tttttctcagGGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAAT
EST: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAG GGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAAT
genomic: TTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGgtatccctac ... tttttctcagGGTACTGCAGATGCTGTAAGGCAGTACTTGTGGTTGTTTGAGGAGCATAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCAAGAGCCTACGGGAGCAACATTGGAGGGTACAAGAATGAAGGGTTTGTTGAAGTCTTAGCTGCACAGCAGAGCCCAGATAATCCAAACTGGTTTCAGgtatccctactactgttgtgtctttctgatttcctcaaatgcaaaatctgccatttctataacatgcacattccacaccatattcacatttttctcattg
- - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC