ERISdb: a Database of Plant Splice Sites

General
Orthologs
EST
RNA-Seq
cis-regulatory elements

Sequence

atgc intronic sequence ATGC exonic sequence

GGCCAAGTCGAAGAACCACACGGCGCATAACCAGTCGTTCAAGGCGCACAAGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgcttccttttccattcttctcaactatgctagatctgaatttgaaaacttgcattccgctgaaacgtgaccatatgcctgtgcccgagtgcaaa...

Basic information

species	Zea mays
transcript	GRMZM2G068496_T01
intron #	2
splice site	5'
intron type	U2

Orthologous splice sites

atgc intronic sequence ATGC exonic sequence

upper sequence: GRMZM2G068496_T01 (Zea mays), 5'ss of exon 2
lower sequence: EFJ26059 (Selaginella moellendorffii), 5'ss of exon 1

GGCCAAGTCGAAGAACCACACGGCGCATAACCAGTCGTTCAAGGCGCACAAGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgcttccttttccattcttctcaactatgctagatctgaatttgaaaacttgcattccgctgaaacgtgaccatatgcctgtgcccgagtgcaaa
||| ||||||||||| ||||| || || |||||||||   |||||||||   || |||||||||||||||||| | || ||| | |||||||  || |||||| ||      || || |    | |      || | ||||   ||  ||| ||  |||                                         
GGCGAAGTCGAAGAATCACACTGCCCACAACCAGTCGAGGAAGGCGCACCGCAATGGCATCAAGAAGCCCAAGAGGCAGCGCTACACCTCCAAGAAAGGGgtaagtagagatttctctagaaattt-----gtgattgatc--gatccgaataccggcag----------------------------------------

upper sequence: GRMZM2G068496_T01 (Zea mays), 5'ss of exon 2
lower sequence: EFJ14460 (Selaginella moellendorffii), 5'ss of exon 1

GGCCAAGTCGAAGAACCACACGGCGCATAACCAGTCGTTCAAGGCGCACAAGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgcttccttttccattcttctcaactatgctagatctgaatttgaaaacttgcattccgctgaaacgtgaccatatgcctgtgcccgagtgcaaa
||| ||||||||||| ||||| || || |||||||||   |||||||||   || |||||||||||||||||| | || ||| | |||||||  || |||||| ||      || |  |    | |      || | ||||   ||  ||| ||  |||                                         
GGCGAAGTCGAAGAATCACACTGCCCACAACCAGTCGAGGAAGGCGCACCGCAATGGCATCAAGAAGCCCAAGAGGCAGCGCTACACCTCCAAGAAAGGGgtaagtagagatttctatagaaattt-----gtgattgatc--gatccgaataccggcag----------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments

ATGC    EST sequence
ATGC    genomic sequence (exon)
ATGC    genomic sequence (truncated intron)

EST: gi|16927455|gb|BM080519.1|BM080519

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|15499510|gb|BI596023.1|BI596023

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCT-CACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|4609951|gb|AI600790.1|AI600790

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076331|gb|FL151811.1|FL151811

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081808|gb|FL151839.1|FL151839

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTT
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTT

EST: gi|211076325|gb|FL151805.1|FL151805

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076335|gb|FL151815.1|FL151815

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCTCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084547|gb|FL151852.1|FL151852

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCG-CAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079079|gb|FL151829.1|FL151829

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084546|gb|FL151851.1|FL151851

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076327|gb|FL151807.1|FL151807

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|78027027|gb|DV495414.1|DV495414

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076333|gb|FL151813.1|FL151813

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGGAAGGGCAACAA
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAA-GGAAGGGCAACAA

EST: gi|211081806|gb|FL151837.1|FL151837

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084545|gb|FL151850.1|FL151850

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|9732159|gb|BE510911.1|BE510911

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|9730959|gb|BE509711.1|BE509711

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079067|gb|FL151817.1|FL151817

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|87155320|gb|DY400109.1|DY400109

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|31664547|gb|CD573480.1|CD573480

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084553|gb|FL151858.1|FL151858

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCG-CAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084554|gb|FL151859.1|FL151859

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|67015315|gb|CO444064.1|CO444064

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199027|gb|FL151870.1|FL151870

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|26557912|gb|CA830147.1|CA830147

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081801|gb|FL151832.1|FL151832

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGC-AGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|9732404|gb|BE511156.1|BE511156

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199028|gb|FL151871.1|FL151871

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211223318|gb|FL027857.1|FL027857

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCG-CAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081807|gb|FL151838.1|FL151838

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081803|gb|FL151834.1|FL151834

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTC-AGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079080|gb|FL151830.1|FL151830

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|9461594|gb|BE453809.1|BE453809

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079078|gb|FL151828.1|FL151828

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199022|gb|FL151865.1|FL151865

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGGAAGGGCAACAA
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAA-GGAAGGGCAACAA

EST: gi|83278566|gb|DV942574.1|DV942574

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079075|gb|FL151825.1|FL151825

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|4775901|gb|AI664904.1|AI664904

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081812|gb|FL151843.1|FL151843

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081810|gb|FL151841.1|FL151841

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084542|gb|FL151847.1|FL151847

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084544|gb|FL151849.1|FL151849

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199024|gb|FL151867.1|FL151867

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199025|gb|FL151868.1|FL151868

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCTCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|31664546|gb|CD573479.1|CD573479

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081814|gb|FL151845.1|FL151845

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084550|gb|FL151855.1|FL151855

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084555|gb|FL151860.1|FL151860

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199019|gb|FL151862.1|FL151862

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|9732403|gb|BE511155.1|BE511155

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACCCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081804|gb|FL151835.1|FL151835

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGGAAGGGCAACAA
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGG-AAGGGCAACAA

EST: gi|211076332|gb|FL151812.1|FL151812

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199029|gb|FL151872.1|FL151872

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084552|gb|FL151857.1|FL151857

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGGCCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|32933214|gb|CF038026.1|CF038026

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081813|gb|FL151844.1|FL151844

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084549|gb|FL151854.1|FL151854

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211199020|gb|FL151863.1|FL151863

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076328|gb|FL151808.1|FL151808

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079074|gb|FL151824.1|FL151824

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084551|gb|FL151856.1|FL151856

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081805|gb|FL151836.1|FL151836

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCANNNAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076326|gb|FL151806.1|FL151806

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081800|gb|FL151831.1|FL151831

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|21891564|gb|BQ744777.1|BQ744777

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079069|gb|FL151819.1|FL151819

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079073|gb|FL151823.1|FL151823

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084543|gb|FL151848.1|FL151848

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211084541|gb|FL151846.1|FL151846

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|113702877|gb|EE680381.1|EE680381

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081802|gb|FL151833.1|FL151833

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211079068|gb|FL151818.1|FL151818

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAARGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211081809|gb|FL151840.1|FL151840

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACMAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGGAAGGGCAACAA
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGG-AAGGGCAACAA

EST: gi|211084548|gb|FL151853.1|FL151853

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211076329|gb|FL151809.1|FL151809

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|78027201|gb|DV495588.1|DV495588

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|9732195|gb|BE510962.1|BE510962

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

EST: gi|211221247|gb|FL027835.1|FL027835

EST:     AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGG                         ATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG
genomic: AGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAG

RNA-Seq data

ATGC Supported by RNA-Seq exonic block that spans over the splice site

atgs Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.

Found data for 4 RNA-Seq libraries.

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1827

GGCCAAGTCGAAGAACCACACGGCGCATAACCAGTCGTTCAAGGCGCACAAGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgctt ... gtgcgtttagATGGACCCGAAGTTTCTGAGGAACTTGAGGTACTCAAGGAAGGGCAACAAGAAGAGTGGGCGAGGCTGAGTCCGAGGAGTAAGATGATGGTGATTGAGTT

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 854

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 646

Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 605

Putative cis-regulatory sequences

atgc	intron	ATGC	exonic elements by Pertea et al.
ATGC	exon	atgc	putative intronic elements
		ATGC	putative exonic elements identified for retained introns

        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGCCAAGTCGAAGAACCACACGGCGCATAACCAGTCGTTCAAGGCGCACAAGAACGGCATCAAGAAGCCCAAGCGCCACCGCCAGACCTCCACCAAGGGGgtacgtgcttccttttccattcttctcaactatgctagatctgaatttgaaaacttgcattccgctgaaacgtgaccatatgcctgtgcccgagtgcaaa

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC