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GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgtttccatctctaattcctctattttcttctatgttctcaagtgagctcatttggtaatgcaaccatatcttttcatttccatgttctgaacag
species | Zea mays |
transcript | GRMZM2G068212_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|88753142|gb|DY537283.1|DY537283
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|149043278|gb|EE047338.2|EE047338
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|211475234|gb|FL335034.1|FL335034
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|71440768|gb|DR821818.1|DR821818
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|71301647|gb|DR786892.1|DR786892
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTACGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|211197944|gb|FL332584.1|FL332584
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGACEST: gi|78086796|gb|DV515189.1|DV515189
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
EST: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCT ACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
genomic: GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgttt ... ttctgaacagACACAGGCTTTGTCCCGTTATTTATATATGCAATATTTGGCTCGTCACGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAATGTCATATGCAAAGCTGGCTGGGCTGCACCCAATTTATGGGCTCTgtaagtgtttccatctctaattcctctattttcttctatgttctcaagtgagctcatttggtaatgcaaccatatcttttcatttccatgttctgaacag
- - - - - - GCAAAG
- - - - - - - AAGCTG