1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AACACTTGGTTCAACATCATACAAGGCAACATTTAGAGATGAATTTATTGATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttctcagccattgatcttcaaacatgtgtctgctgtatttatgacatagtttcatacttcatggacataccattctgtaattttgcatcattaa...
species | Zea mays |
transcript | GRMZM2G068151_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCATEST: gi|71330078|gb|DR801779.1|DR801779
genomic: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCAT
EST: TACGAGGACAACTGAAAGCA-CAGTAGCTCGATTACTCCCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACEST: gi|78116848|gb|DV535235.1|DV535235
genomic: TACGAGGACCACTGAA-GCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGAC
EST: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCATEST: gi|60353832|gb|DN220805.1|DN220805
genomic: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCAT
EST: TAGCTCGATTACTCCCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCATEST: gi|78107465|gb|DV525883.1|DV525883
genomic: TAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCAT
EST: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCATEST: gi|71321873|gb|DR797626.1|DR797626
genomic: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCAT
EST: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCTCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCATEST: gi|33100410|gb|CF060370.1|CF060370
genomic: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCAT
EST: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAG AGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCACTTCAGCAT
genomic: ATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttct ... tcacctgcagAGTTTGAAGGAGTTTAAAACGCAAGCGACCACATTGGCATCGCTTCAGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACACTTGGTTCAACATCATACAAGGCAACATTTAGAGATGAATTTATTGATACGAGGACCACTGAAGCAACAGTAGCTCGATTACTCCCCTCCACTCAGgtacctttctcagccattgatcttcaaacatgtgtctgctgtatttatgacatagtttcatacttcatggacataccattctgtaattttgcatcattaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA