1 5' 3' | 2 5' 3' | 3 5' 3' |
GGGCTGCTATGGCGCGGGGGCGCCGTTCGGCCGCAAGGCGGAGGACCCGGAGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg
species | Zea mays |
transcript | GRMZM2G067743_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGG GAGGCCCACGGAGACTCCAAEST: gi|211232358|gb|FL302933.1|FL302933
genomic: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg ... gGAGGCCCACGGAGACTCCAA
EST: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGG GAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGEST: gi|101395870|gb|EB819862.1|EB819862
genomic: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg ... gGAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGAGCCGTTCAAGAAAGCCT
EST: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGG GAGGCCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAEST: gi|78104884|gb|DV523302.1|DV523302
genomic: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg ... gGAGGCCC-ACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGAGCCGTTCAAGAAA-GC
EST: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGG GAGGGCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGEST: gi|50339441|gb|CO534567.1|CO534567
genomic: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg ... gGAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGAGCCGTTCAAGAA
EST: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGG GAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGEST: gi|91877772|gb|EB407729.1|EB407729
genomic: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg ... gGAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGAGCCGTTCAAGAAAGCCT
EST: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGG GAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAG
genomic: AGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg ... gGAGGCCCACGGAGACTCCAAGTACTGCGAGAAGCACATCCACCGCGGGAAGAGCCGTTCAAGAAAGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGCTGCTATGGCGCGGGGGCGCCGTTCGGCCGCAAGGCGGAGGACCCGGAGCCCGGGCGGTGCCGGCGGACGGACGGCAAGAAGTGGCGATGCTCCAGGg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT