1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGATGGGGTTCTGCAAGCCGCGGATGCCAAGGATTGGGTTTACAAGGGGGAAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctgagtaggttcttactgagtgtgcacgcatcgatcacttgattttaggggctcaatgtgtgattcacgggtgccgccattcgagctccagat...
species | Zea mays |
transcript | GRMZM2G067299_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|78112747|gb|DV531141.1|DV531141
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|211273588|gb|FL063642.1|FL063642
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGCCGCCGCGAATCTCATCCTCAGCTACACCGGCACGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|149086246|gb|EE175786.2|EE175786
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|149079157|gb|EE168093.2|EE168093
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|71317285|gb|DR795328.1|DR795328
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|94477323|gb|EB706281.1|EB706281
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|71772065|gb|DR970002.1|DR970002
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGGEST: gi|94473867|gb|EB702825.1|EB702825
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
EST: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATG CTTGGCAAGGTACTGCGGCTCAGGAAGATTCTAAAAAACAAGTCGCAGCGG
genomic: AAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctg ... ttgttttcagCTTGGCAAGGTACTGCGGCTCAAGAAGATTCTAAAAAACAAGTCGCAGCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATGGGGTTCTGCAAGCCGCGGATGCCAAGGATTGGGTTTACAAGGGGGAAGGCGCCGCGAATCTTATCCTCAGCTACACCGGCTCGTCGCCCTCCATGgtaagcgctgagtaggttcttactgagtgtgcacgcatcgatcacttgattttaggggctcaatgtgtgattcacgggtgccgccattcgagctccagat
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