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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACATGAGGGAAGATACTCCATCTATGTGCACGCATCACGTGAAAAGCCTGTTCATACTAGTTCTTTGTTTGCTGGTCGGGATATTCACAGTGATGCGgtaataatttttgtctgtgtttcatttccttttcaaagcaactcagactacatagaaaagaattcactcagtttatgagggaaactaagcccaaaaacct...

Basic information

species Zea mays
transcript GRMZM2G061465_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G061465_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os06g45110.1 (Oryza sativa), 5'ss of exon 3
GGACATGAGGGAAGATACTCCATCTATGTGCACGCATCACGTGAAAAGCCTGTTCATACTAGTTCTTTGTTTGCTGGTCGGGATATTCACAGTGATGCGgtaataatttttgtctgtgtttcatttccttttcaaagcaactc---agactacatagaaaagaattcactcagtttatgagggaaactaagcccaaaaacct
|| || ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||| | |||  |||       |||   | || || ||   ||    || ||  |     |  |   | |     |   |   |     |     ||| |  
GGTCAGGAGGGAAGATACTCCATCTATGTTCATGCATCACGTGAAAAGCCTGTACATACTAGTTCTTTGTTTGTTGGTCGTGATATTCACAGTGACGCGgtaattactttcatcttcagaa-attctgtatttaatgcctttcctttgattatgttctttattaaggatttgacctgcaaaatatgtctattttcaaagc--