1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTACCTGCGGCCATAACTACATTCCCGTCCTCCGCCCAAATCGTGCCGGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCAgtaagttcattctaaactgtacaatttttttttcttcttcttctagcttgctaggctggactatctctggtttttaattcgaaaaataggaacagaatct...
species | Zea mays |
transcript | GRMZM2G060800_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCA TACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTGEST: gi|58029607|gb|CX725034.1|CX725034
genomic: GGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCAgtaagttcat ... tccactgtagTACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTG
EST: GGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCA TACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTGEST: gi|6564146|gb|AW231768.1|AW231768
genomic: GGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCAgtaagttcat ... tccactgtagTACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTG
EST: GTGCTCATCATCTCAGCCTGGAACTACCCTTTCA TACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTGEST: gi|78111538|gb|DV529935.1|DV529935
genomic: GTGCTCATCATCTCAGCCTGGAACTACCCTTTCAgtaagttcat ... tccactgtagTACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTG
EST: GGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCA TACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTG
genomic: GGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCAgtaagttcat ... tccactgtagTACTCTCTATCGACCCAGTCATTGGAGCAATCGCTGCTGGAAATGCTGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACCTGCGGCCATAACTACATTCCCGTCCTCCGCCCAAATCGTGCCGGAGCCCCTCGGCGTCGTGCTCATCATCTCAGCCTGGAACTACCCTTTCAgtaagttcattctaaactgtacaatttttttttcttcttcttctagcttgctaggctggactatctctggtttttaattcgaaaaataggaacagaatct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaacagaa