1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACTGCTGCCTCGCGCTGTGGTGgtgagccatccatcgaccctgcctagcagatctcaccgtcaccgtcttctgcgggctttgagtctcgaacccctagccttccgtagatccgaggacactt...
species | Zea mays |
transcript | GRMZM2G060564_T04 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGCACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520841|gb|FL034048.1|FL034048
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|71768983|gb|DR966920.1|DR966920
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520834|gb|FL034041.1|FL034041
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520840|gb|FL034047.1|FL034047
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211397639|gb|FL034039.1|FL034039
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520835|gb|FL034042.1|FL034042
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|78090964|gb|DV519338.1|DV519338
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520842|gb|FL034049.1|FL034049
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520839|gb|FL034046.1|FL034046
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|101396680|gb|EB820265.1|EB820265
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACGTGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520837|gb|FL034044.1|FL034044
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520836|gb|FL034043.1|FL034043
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATEST: gi|211520838|gb|FL034045.1|FL034045
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
EST: CCTACTGCTGCCTCGCGCTGTGGTG TGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
genomic: CCTACTGCTGCCTCGCGCTGTGGTGgtgagccatc ... ttctgttcagTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGCTGCCTCGCGCTGTGGTGgtgagccatccatcgaccctgcctagcagatctcaccgtcaccgtcttctgcgggctttgagtctcgaacccctagccttccgtagatccgaggacactt
- TGCTGC
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