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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATGGCGCTTCCTGCGTCACCGTCGCCCGTCGCCATGGTTTGGGCAAGGCAGGGACGCCTCCAGCAGCGCTACGATGGTTGCTACCGCCTTGTATCAGGgtactaaactactttgcgcacatggacacctggttcattaagcatgcatgcatgctctactatatgcatttcattagcaatttgacagatgtagtgcaat...

Basic information

species Zea mays
transcript GRMZM2G057963_T02
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|74233575|gb|DT641489.1|DT641489
EST:     CAGGGACGCCTCCAGCAGCGCTACGATGGTTGCTACCGCCTTGTATCAGG                         ATGCATTCCTTACACGCTCAAAGAGGATGCTGTGGAGGAGGGTGCTGGAAA
genomic: CAGGGACGCCTCCAGCAGCGCTACGATGGTTGCTACCGCCTTGTATCAGGgtactaaact ... tatatgccagATGCATTCCTTACACGCTCAAAGAGGATGCTGTGGAGGAGGGTGCTGGAAA
EST: gi|78075588|gb|DV504022.1|DV504022
EST:     CAGGGACGCCTCCAGCAGCGCTACGATGGTTGCTACCGCCTTGTATCAGG                         ATGCATTCCTTACACGCTCAAAGAGGATGCTGTGGAGGAGGGTGCTGGAAA
genomic: CAGGGACGCCTCCAGCAGCGCTACGATGGTTGCTACCGCCTTGTATCAGGgtactaaact ... tatatgccagATGCATTCCTTACACGCTCAAAGAGGATGCTGTGGAGGAGGGTGCTGGAAA