1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTTCCCTCCCTTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgattattgtgggtgctatttgttcatttgttcctgcatttttcattgtggcttagcagatgtctgaaaaacgtgtgaaatgtaggcaaggtac...
species | Zea mays |
transcript | GRMZM2G055667_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATCCGTGACATCCTGCCACATAG GTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATAEST: gi|211366504|gb|FL067546.1|FL067546
genomic: GATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
EST: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAG GTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATAEST: gi|149001245|gb|EE038521.2|EE038521
genomic: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
EST: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAG GTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATAEST: gi|149076117|gb|EE164700.2|EE164700
genomic: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
EST: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAG GTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATAEST: gi|211366507|gb|FL067549.1|FL067549
genomic: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
EST: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAG GTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATAEST: gi|211366505|gb|FL067547.1|FL067547
genomic: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
EST: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAG GTTTCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATAEST: gi|211366506|gb|FL067548.1|FL067548
genomic: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
EST: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAG GTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
genomic: TTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgat ... atgcatgtagGTTCCCGTTTCTTCTGGTTGACAGAGTTATTGATTACAAACCAGGAGAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTCCCTCCCTTCCCAACTGTCATGGACATCAACCAGATCCGTGACATCCTGCCACATAGgtgagtcgattattgtgggtgctatttgttcatttgttcctgcatttttcattgtggcttagcagatgtctgaaaaacgtgtgaaatgtaggcaaggtac
- - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaacg