1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTTGTGGTGCTAGGGGACCGAGACCGAGATATCCCCGTGTGTGGAAAACTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGTgtgaggttcttcaacgtttctctgttgaaaaatagttgtgtctgtatactcttgtgcatcgccttgacatcctgctgaattaactttagtccattcctac...
species | Zea mays |
transcript | GRMZM2G040970_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGT ATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCAEST: gi|101387775|gb|EB815902.1|EB815902
genomic: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGTgtgaggttct ... tcccgtgcagATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCA
EST: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGT ATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCAEST: gi|71418677|gb|DR804506.1|DR804506
genomic: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGTgtgaggttct ... tcccgtgcagATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCA
EST: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGT ATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCAEST: gi|93013104|gb|EB638624.1|EB638624
genomic: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGTgtgaggttct ... tcccgtgcagATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCA
EST: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGT ATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCA
genomic: CTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGTgtgaggttct ... tcccgtgcagATTAAAGGTCTGTCTAATGTAAAGGAGGAAGTTTATGGGGCACTTGACTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGTGGTGCTAGGGGACCGAGACCGAGATATCCCCGTGTGTGGAAAACTCGTAAGAAAATTGGGACTATTTCCAAGTCGCAGAAGCTTGTCGAATGTgtgaggttcttcaacgtttctctgttgaaaaatagttgtgtctgtatactcttgtgcatcgccttgacatcctgctgaattaactttagtccattcctac
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC