Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|14569367|gb|BI097690.1|BI097690EST: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAG GTTAGACGGTTGCGAGTGCAGCAGCGTATCCGAACTTCTGAAAGCAAAGAT
genomic: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAGgttttcagtt ... atttaatcagGTTAGACGGTTGCGAGTGCAGCAGCGTATCCGAACTTCTGAAAGCAAAGAT
EST:
gi|211402466|gb|FL130197.1|FL130197EST: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAASAG GTTAGACGGTTGCGAGTGC
genomic: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAGgttttcagtt ... atttaatcagGTTAGACGGTTGCGAGTGC
EST:
gi|211402472|gb|FL130203.1|FL130203EST: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAG GTTAGACGGTTGCGAGTGCAGCAGCGTATCCGAACTTCTGAAAGCAAAGAT
genomic: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAGgttttcagtt ... atttaatcagGTTAGACGGTTGCGAGTGCAGCAGCGTATCCGAACTTCTGAAAGCAAAGAT
EST:
gi|148979158|gb|EE026552.2|EE026552EST: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAG GTTAGACGGTTGCGAGTGCAGCAGCCTATCCGAACTTCTGAAAGCAAAGAT
genomic: AAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAGgttttcagtt ... atttaatcagGTTAGACGGTTGCGAGTGCAGCAGCGTATCCGAACTTCTGAAAGCAAAGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGGTCCAGAGACGATCGAGGACTTTGCTCAAATGCAATCGCAGGAGATTGAAGACAACATCATGAGCCGACGCAACAAAATTTTCCTTCTGATGGAAGAGgttttcagttttgaacactgtgtgtttcatttgtccagttctagctatctatttgtagctttgctaagacaccatggtgaagttttctgtatggaaaatttaatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA