Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCAATCTTCTGTCCATTAGTTGCGAAGGAATTGATGGATAAATTCTCTTATGGTCTGGGATTACCGGTTATGATTGCAGCAGTTCTATTCACAGCATATgtgagtatcgttcttagccttttcaaatcaccacacatttatttccttagcctacaggtatcgctacttaatacatatgcagttattggaacaatatgag...

Basic information

species Zea mays
transcript GRMZM2G034833_T02
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G034833_T02 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os01g70100.1 (Oryza sativa), 5'ss of exon 2
ATCAATCTTCTGTCCATTAGTTGCGAAGGAATTGATGGATAAATTCTCTTATGGTCTGGGATTACCGGTTATGATTGCAGCAGTTCTATTCACAGCATATgtgagtatcgttcttagccttttcaaatcaccacacatttatttccttagcctacaggtatcgctacttaatacatatgcagttattggaacaatatgag------
 |||||||| |||   || ||||| || ||| ||||| |||| || |||||||||||||||||||| || |||||| |||||||| | ||||| |||||||| ||||||  | | | ||||||||| | |||      ||  ||  ||  |  | | || | || | ||| || || ||   || |||| | |   ||        
GTCAATCTTTTGTTTGTTCGTTGCCAAAGAACTGATGAATAACTTTTCTTATGGTCTGGGATTACCAGTAATGATTTCAGCAGTTGTGTTCACGGCATATgtaagtatcactgtcaaccttttcaatttacctt---cttcattggtttccacaaatgtgttgcaa-ttagtatatgtg--atttttgggataggttgtaattgaa