1 5' 3' | 2 5' 3' | 3 5' 3' |
GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaacacaaaaatcaaactcattttatttccatcttccatgtctgccgtaccagcgctaaacgttggtttctcccgaatcccgatccactgtatggcag
species | Zea mays |
transcript | GRMZM2G034668_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGCEST: gi|37416798|gb|CF646050.1|CF646050
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGCEST: gi|37418829|gb|CF647087.1|CF647087
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGCEST: gi|5268682|gb|AI770646.1|AI770646
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGCEST: gi|76287085|gb|DV026653.1|DV026653
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGCEST: gi|76287084|gb|DV026652.1|DV026652
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
EST: CGTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGCEST: gi|38687936|gb|CK144967.1|CK144967
genomic: CGTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCEST: gi|211145324|gb|FL227338.1|FL227338
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATC
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCCGAACCTGAACCACGACACGGCCAAGEST: gi|67020876|gb|CO449625.1|CO449625
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCC-GAACCTGAACCACGACACGGCCAAG
EST: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAG CCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
genomic: GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaa ... tgtatggcagCCATTATGATCTACAAGGTGTTTCCGAACCTGAACCACGACACGGCCAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCATCCTGTTCTTATGCTGATCGGCTACATTATCCTCGGCAGTGAAGgtaacagcaacacaaaaatcaaactcattttatttccatcttccatgtctgccgtaccagcgctaaacgttggtttctcccgaatcccgatccactgtatggcag
- - - - - - - ATGCTG
- - - - - - - - GCTGAT