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CTACGAATTTCTCGACTACTACCGAGCTCCAAATGGCCCGATCTTCCTATACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaatgagtatatagacatgcagtcacatatttttagttaaatgattggacatcttatactgcttactctaactctagacatgattcatattcataatttactcaaccatttgtgtgcaacaactttggctgttagataacatatacatatggatggattag
species | Zea mays |
transcript | GRMZM2G031572_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCT GTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATACEST: gi|31357650|gb|CD442007.1|CD442007
genomic: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaa ... gatggattagGTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATAC
EST: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCT GTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATACEST: gi|93011649|gb|EB637169.1|EB637169
genomic: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaa ... gatggattagGTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATAC
EST: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCT GTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCCCCGATACEST: gi|211493121|gb|FL031303.1|FL031303
genomic: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaa ... gatggattagGTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATAC
EST: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCT GTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATACEST: gi|211493120|gb|FL031302.1|FL031302
genomic: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaa ... gatggattagGTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATAC
EST: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCT GTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATACEST: gi|211469990|gb|FL213489.1|FL213489
genomic: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaa ... gatggattagGTGGTGGCAAAGAAATTTGGTGCTGCATTGGTTTCTCCTGAGCATCGATAC
EST: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCT GTGGTGGCAAAGAAATTTGGTGCTGCAATTGGTTTCTCCTGAGCATCGATA
genomic: ACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaa ... gatggattagGTGGTGGCAAAGAAATTTGGTGCTGCA-TTGGTTTCTCCTGAGCATCGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTACGAATTTCTCGACTACTACCGAGCTCCAAATGGCCCGATCTTCCTATACATCTGTGGAGAATCTACGTGCAATGGGATTGGCAATAACTACTTAGCTgtaagtttaatgagtatatagacatgcagtcacatatttttagttaaatgattggacatcttatactgcttactctaactctagacatgattcatattcataatttactcaaccatttgtgtgcaacaactttggctgttagataacatatacatatggatggattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA